null.breadth.focal.summary: null.breadth.focal.summary

In ordiBreadth: Ordinated Diet Breadth

Description

Summarizes results contained in object created by null.breadth.focal

Usage

null.breadth.focal.summary(null.breadth.focal.out, quantiles = c(0.025, 0.975), 
round = 5, scaled = FALSE)

Arguments

null.breadth.focal.out	Object created by null.breadth.focal
quantiles	A vector length of two indicating the lower and upper quantiles to report for the null distribution.
round	A value indicating the number of digits to round results
scaled	Logical indicating whether to return scaled ordinated host breadth.

Value

Returns a dataframe of summarized results.

Author(s)

James Fordyce

References

Fordyce, J.A., C.C. Nice, C.A. Hamm, & M.L. Forister. Quantifying diet breadth through ordination of host association. Ecology

Examples

testdata<-	
	c(		
			0,0,0,0,1,0,0,0,0,0,#1
			0,0,0,0,0,0,1,1,0,0,#2
			1,1,1,0,0,0,0,0,0,0,#3
			0,0,0,0,1,1,0,1,0,1,#4
			1,1,1,0,0,0,1,0,0,0,#4
			1,1,0,0,1,0,1,0,0,0,#4
			0,0,0,1,0,0,1,0,1,1,#4
			1,0,1,0,1,1,0,0,0,1, #5
			1,1,0,0,1,0,0,1,1,1,#6
			1,1,1,0,1,1,0,1,1,1) #8


dat<-array(dim=c(10,10),data=testdata)
dat<-t(dat)
colnames(dat)<-paste("",LETTERS[1:10],sep="")
rownames(dat)<-paste("bug",1:10,sep="")

x<-null.breadth.focal(dat)
null.breadth.focal.summary(x)

ordiBreadth documentation built on May 2, 2019, 9:41 a.m.