ouch: Ornstein-Uhlenbeck Models for Phylogenetic Comparative Hypotheses

Fit and compare Ornstein-Uhlenbeck models for evolution along a phylogenetic tree.

Author
Aaron A. King <kingaa@umich.edu> and Marguerite A. Butler <mbutler@hawaii.edu>
Date of publication
2015-07-10 20:33:01
Maintainer
Aaron A. King <kingaa@umich.edu>
License
GPL (>= 2)
Version
2.9-2
URLs

View on CRAN

Man pages

anolis.ssd
Greater Antillean anolis lizard sexual size dimorphism data.
ape2ouch
Convert an "ape" tree to an "ouch" tree.
bimac
Anolis bimaculatus lizard size data.
brown
Fit a Brownian-motion model of evolution along a phylogenetic...
browntree-class
Fitted phylogenetic Brownian motion model
hansen
Hansen model of evolution along a phylogenetic tree
hansentree-class
hansen tree object
hansentree-methods
Methods of the "hansentree" class
ouch-package
Ornstein-Uhlenbeck methods for comparative phylogenetic...
ouchtree-class
Phylogenetic tree object in 'ouch' format.
paint
Painting selective regimes on a phylogenetic tree.

Files in this package

ouch
ouch/inst
ouch/inst/OCHANGELOG
ouch/inst/CITATION
ouch/inst/NEWS.Rd
ouch/inst/NEWS
ouch/inst/ChangeLog
ouch/inst/GPL
ouch/src
ouch/src/ouch.h
ouch/src/covar-matrix.c
ouch/src/weight-matrix.c
ouch/NAMESPACE
ouch/data
ouch/data/bimac.csv.gz
ouch/data/anolis.ssd.csv.gz
ouch/R
ouch/R/brown.R
ouch/R/hansen.R
ouch/R/ape2ouch.R
ouch/R/plot.R
ouch/R/paint.R
ouch/R/glssoln.R
ouch/R/rmvnorm.R
ouch/R/methods.R
ouch/R/ouchtree.R
ouch/MD5
ouch/DESCRIPTION
ouch/man
ouch/man/anolis.ssd.Rd
ouch/man/browntree-class.Rd
ouch/man/ape2ouch.Rd
ouch/man/brown.Rd
ouch/man/hansentree-class.Rd
ouch/man/hansen.Rd
ouch/man/paint.Rd
ouch/man/bimac.Rd
ouch/man/hansentree-methods.Rd
ouch/man/ouch-package.Rd
ouch/man/ouchtree-class.Rd