pedStatSummary: Post-processes output from pedigreeStats
In pedantics: Functions to Facilitate Power and Sensitivity Analyses for Genetic Studies of Natural Populations
Description
Usage
Arguments
Value
Author(s)
References
Description
Generates a manageable summary of pedigree-wide statistics
reported by pedigreeStats, either for a single pedigree or
for a comparison between pedigrees
Usage
1
pedStatSummary(pedStats,pedStats2=NULL)
Arguments
pedStats
An output data list from pedgireeStats
pedStats2
An optional output data list from pedgireeStats
Value
Returns a table of numbers of records, maternities,
paternities, pairwise sibship relationships, numbers
of different classes of grand-parental relationships,
pedigree depth, number of founders, mean subship sizes,
simple statistics of numbers of inbred and non-inbred
indivdiuals, and proportions of pairwise relationship
coefficients equal to or greater than several
thresholds.
Author(s)
Michael Morrissey michael.morrissey@st-andrews.ac.uk
References
Morrissey, M.B, and A.J. Wilson, 2009. pedantics, an R package for pedigree-based genetic simulation, and pedigree manipulation, characterisation, and viewing. Molecular Ecology Resources.
pedantics documentation built on May 1, 2019, 10:54 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Author(s) References
Description
Generates a manageable summary of pedigree-wide statistics reported by pedigreeStats, either for a single pedigree or for a comparison between pedigrees
Usage
1 | pedStatSummary(pedStats,pedStats2=NULL)
|
Arguments
pedStats |
An output data list from pedgireeStats |
pedStats2 |
An optional output data list from pedgireeStats |
Value
Returns a table of numbers of records, maternities, paternities, pairwise sibship relationships, numbers of different classes of grand-parental relationships, pedigree depth, number of founders, mean subship sizes, simple statistics of numbers of inbred and non-inbred indivdiuals, and proportions of pairwise relationship coefficients equal to or greater than several thresholds.
Author(s)
Michael Morrissey michael.morrissey@st-andrews.ac.uk
References
Morrissey, M.B, and A.J. Wilson, 2009. pedantics, an R package for pedigree-based genetic simulation, and pedigree manipulation, characterisation, and viewing. Molecular Ecology Resources.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.