print: Print a PHATE object

In phateR: PHATE - Potential of Heat-Diffusion for Affinity-Based Transition Embedding

Description

This avoids spamming the user's console with a list of many large matrices

Usage

## S3 method for class 'phate'
print(x, ...)

Arguments

x	A fitted PHATE object
...	Arguments for print()

Examples

if (reticulate::py_module_available("phate")) {

# data(tree.data)
# We use a smaller tree to make examples run faster
data(tree.data.small)
phate.tree <- phate(tree.data.small$data)
print(phate.tree)
## PHATE embedding with elements
## $embedding : (3000, 2)
## $operator : Python PHATE operator
## $params : list with elements (data, knn, decay, t, n.landmark, ndim,
##                               gamma, npca, mds.method,
##                               knn.dist.method, mds.dist.method)

}

phateR documentation built on Feb. 12, 2021, 5:12 p.m.