normalized_diff_ind: Calculate a normalized difference.

In photobiology: Photobiological Calculations

Calculate a normalized difference.

Description

This method returns a normalized difference index value for an arbitrary pair of wavebands. There are many such indexes in use, such as NDVI (normalized difference vegetation index), NDWI (normalized difference water index), NDMI (normalized difference moisture index), etc., the only difference among then is in the wavebands used.

Usage

normalized_diff_ind(spct, w.band.plus, w.band.minus, f, ...)

normalised_diff_ind(spct, w.band.plus, w.band.minus, f, ...)

NDxI(spct, w.band.plus, w.band.minus, f, ...)

## Default S3 method:
normalized_diff_ind(spct, w.band.plus, w.band.minus, f, ...)

## S3 method for class 'generic_spct'
normalized_diff_ind(spct, w.band.plus, w.band.minus, f, ...)

## S3 method for class 'generic_mspct'
normalized_diff_ind(spct, w.band.plus, w.band.minus, f, ...)

Arguments

spct	an R object
w.band.plus, w.band.minus	waveband objects The wavebands determine the regions of the spectrum used in the calculations.
f	function used for integration taking spct as first argument and a list of wavebands as second argument.
...	additional arguments passed to f

Details

f is most frequently reflectance, but also transmittance, or even absorbance, response, irradiance or a user-defined function can be used if there is a good reason for it. In every case spct should be of the class expected by f. When using two wavebands of different widths do consider passing to f a suitable quantity argument, for example to compare averages rather than integrals. Wavebands can describe weighting functions if desired.

\mathrm{NDxI} = \frac{f(s, wb_\mathrm{plus}) - f(s, wb_\mathrm{minus})}{f(s, wb_\mathrm{plus}) + f(s, wb_\mathrm{minus})}

Value

A named numeric value for the index, or a tibble depending on whether a spectrum or a collection of spectra is passed as first argument. If the wavelength range of spct does not fully overlap with both wavebands NA is silently returned.

Methods (by class)

• normalized_diff_ind(default): default

• normalized_diff_ind(generic_spct):

• normalized_diff_ind(generic_mspct):

Note

Some NDxI indexes are directly based on satellite instrument data, such as those in the Landsat satellites. To simulate such indexes using spectral reflectande as input, constructors of waveband definitions from package 'photobiologyWavebands' can be useful.

normalised_diff_ind() is a synonym for normalized_diff_ind().

NDxI() is a shorthand for normalized_diff_ind().

See Also

Rfr_normdiff

photobiology documentation built on Oct. 21, 2023, 1:06 a.m.