split_irradiance: Energy or photon irradiance for split spectrum regions

In photobiology: Photobiological Calculations

Energy or photon irradiance for split spectrum regions

Description

This function returns the energy or photon irradiance for a series of contiguous wavebands from a radiation spectrum. The returned values can be either absolute or relative to their sum.

Usage

split_irradiance(
  w.length,
  s.irrad,
  cut.w.length = range(w.length),
  unit.out = getOption("photobiology.base.unit", default = "energy"),
  unit.in = "energy",
  scale = "absolute",
  check.spectrum = TRUE,
  use.cached.mult = FALSE,
  use.hinges = getOption("photobiology.use.hinges", default = NULL)
)

Arguments

w.length	numeric Vector of wavelengths [nm].
s.irrad	numeric vector of spectral irradiances in [W\,m^{-2}\,nm^{-1}] or [mol\,s^{-1}\,sm^{-2}\,nm^{-1}] as indicated by the argument pased to unit.in.
cut.w.length	numeric Vector of wavelengths [nm].
unit.out, unit.in	character Allowed values "energy", and "photon", or its alias "quantum".
scale	a character A string indicating the scale used for the returned values ("absolute", "relative" or "percent").
check.spectrum	logical Flag indicating whether to sanity check input data, default is TRUE.
use.cached.mult	logical Flag indicating whether multiplier values should be cached between calls.
use.hinges	logical Flag indicating whether to insert "hinges" into the spectral data before integration so as to reduce interpolation errors at the boundaries of the wavebands.

Value

A numeric vector of irradiances with no change in scale factor if scale == "absolute", [W\,m^{-2}] or [mol\,s^{-1}\,sm^{-2}] depending on the argument passed to unit.out or relative values (as fraction of one if scale == "relative" or percentages if scale == "percent" of photons or energy depending on the argument passed to unit.out.

Note

The last three parameters control speed optimizations. The defaults should be suitable in most cases. If you set check.spectrum=FALSE then you should call check_spectrum at least once for your spectrum before using any of the other functions. If you will use repeatedly the same SWFs on many spectra measured at exactly the same wavelengths you may obtain some speed up by setting use.cached.mult=TRUE. However, be aware that you are responsible for ensuring that the wavelengths are the same in each call, as the only test done is for the length of the w.length vector.

Examples

with(sun.data,
      split_irradiance(w.length, s.e.irrad,
                       cut.w.length = c(300, 400, 500, 600, 700),
                       unit.out = "photon"))

photobiology documentation built on Oct. 21, 2023, 1:06 a.m.