phyloland: Modelling Competitive Exclusion and Limited Dispersal in a Statistical Phylogeographic Framework
Version 1.3

Phyloland package models a space colonization process mapped onto a phylogeny, it aims at estimating limited dispersal and ecological competitive exclusion in a Bayesian MCMC statistical phylogeographic framework (please refer to phyloland-package help for details.)

AuthorLouis Ranjard, Marie Paturel
Date of publication2014-09-13 07:55:48
MaintainerLouis Ranjard <l.ranjard@auckland.ac.nz>
LicenseGPL-2
Version1.3
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("phyloland")

Getting started

Package overview

Popular man pages

Banza: Banza MCMC output
phyloland-internal: Internal phyloland Functions
phyloland-package: Modelling competition and dispersal in a statistical...
PLD_interface: Model parameters and internal locations estimations
PLD_plot_stat_mig: Plot dispersal statistics
PLD_stat_mig: Dispersal statistics
tree_Banza.nex: Phylogenetic tree of Banza
See all...

All man pages Function index File listing

Man pages

Banza: Banza MCMC output
phyloland-internal: Internal phyloland Functions
phyloland-package: Modelling competition and dispersal in a statistical...
PLD_interface: Model parameters and internal locations estimations
PLD_loc_mrca: Location of Most Recent Common Ancestor
PLD_plot_stat_mig: Plot dispersal statistics
PLD_plot_trees: Plot sampled trees
PLD_stat_mig: Dispersal statistics
tree_Banza.nex: Phylogenetic tree of Banza

Functions

Files

inst
inst/extdata
inst/extdata/locations_Banza.txt
inst/extdata/tree_Banza.nex.txt
src
src/main.c
NAMESPACE
data
data/Banza.RData
R
R/pack_Phylogeo_Functions_g.R
R/zzz.R
MD5
DESCRIPTION
man
man/phyloland-internal.Rd
man/PLD_stat_mig.Rd
man/PLD_loc_mrca.Rd
man/phyloland-package.Rd
man/Banza.Rd
man/PLD_plot_stat_mig.Rd
man/PLD_plot_trees.Rd
man/PLD_interface.Rd
man/tree_Banza.nex.Rd
phyloland documentation built on May 19, 2017, 6:41 p.m.

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