This function computes phylogenetic signal statistics and pvalues for bootsrapped replicates a phylogenetic tree and produce boxplots to represent the results. This can be useful to check the impact of phylogenetic reconstruction uncertainty on phylogenetic signal.
1 2  phyloSignalBS(p4d, multiphylo, methods = c("all", "I", "Cmean", "Lambda", "K",
"K.star"), reps = 999, W = NULL, pb = TRUE)

p4d 
a 
multiphylo 
a 
methods 
a character vector giving the methods to compute phylogenetic signal (see 
reps 
an integer. The number of repetitions for the estimation of p.values with randomization. 
W 
an optional matrix of phylogenetic weights to compute Moran's I. By default the matrix
is computed with the function 
pb 
a logical. Should a progress bar be printed? (default 
Time consumption can be important if there are many bootraped trees and tested traits.
The data generated are returned invisibly as a list.
Questions? Problems? Suggestions? Tweet to @rdrrHQ or email at ian@mutexlabs.com.
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