plot.phylocorrelogram: Plot a phylogenetic correlogram

Description Usage Arguments Examples

View source: R/correlogram.R

Description

This function plots phylogenetic correlograms produced by phyloCorrelogram

Usage

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## S3 method for class 'phylocorrelogram'
plot(x, show.ci = TRUE, show.h0 = TRUE,
  show.test = TRUE, xlab = "Phylogenetic distance", ylab = "Correlation",
  main = "Phylogenetic correlogram", ...)

Arguments

x

a phylocorrelogram object.

show.ci

a logical indicating whether to plot the confidence interval envelop (default TRUE).

show.h0

a logical indicating whether to plot the the line showing the expected value of Moran's I under the null hypothesis of no phylogenetic autocorrelation (default TRUE).

show.test

a logical indicating whether to plot indicator of significance (default TRUE).

xlab

a label for the x axis.

ylab

a label for the y axis.

main

a main title for the plot

...

other graphical parameters passed to the plot function.

Examples

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## Not run: 
data(navic)
pc <- phyloCorrelogram(navic)
plot(pc)

## End(Not run)

phylosignal documentation built on May 30, 2017, 12:50 a.m.

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