Man pages for phylospatial
Spatial Phylogenetic Analysis
| benefit | Calculate taxon conservation benefit |
| clade_dist | Pairwise distances among clades or nodes |
| moss | Load California moss spatial phylogenetic data |
| phylospatial | Create a spatial phylogenetic object |
| phylospatial-package | phylospatial: Spatial Phylogenetic Analysis |
| plot_lambda | Plot alternative lambda values |
| plot.phylospatial | Plot a 'phylospatial' object |
| ps_add_dissim | Add community dissimilarity data to a 'phylospatial' object |
| ps_canape | Categorical Analysis of Neo- and Paleo-Endemism (CANAPE) |
| ps_canaper | Binary randomization tests including CANAPE |
| ps_dissim | Quantitative phylogenetic dissimilarity |
| ps_diversity | Calculate spatial phylogenetic diversity and endemism metrics |
| ps_get_comm | Get 'phylospatial' community data |
| ps_ordinate | Community phylogenetic ordination |
| ps_prioritize | Phylogenetic conservation prioritization |
| ps_rand | Null model randomization analysis of alpha diversity metrics |
| ps_regions | Cluster analysis to identify phylogenetic regions |
| ps_regions_eval | Evaluate region numbers |
| ps_rgb | Map phylospatial data onto RGB color bands |
| ps_simulate | Simulate a toy spatial phylogenetic data set |
| quantize | Stratified randomization of community matrix |
| to_spatial | Convert a site-by-variable matrix into a SpatRaster or sf... |
