build_tree_ranges_fast: Fast clade range building with precomputed descendants

In phylospatial: Spatial Phylogenetic Analysis

Fast clade range building with precomputed descendants

Description

Lightweight version of build_tree_ranges() that uses precomputed descendant information and skips validation.

Usage

build_tree_ranges_fast(
  tree,
  tip_comm,
  data_type,
  descendants,
  clade_fun = NULL
)

Arguments

tree	A phylo object
tip_comm	Tip community matrix (sites x tips)
data_type	Data type string
descendants	Precomputed list from precompute_descendants()
clade_fun	Custom aggregation function (used if data_type is "other")

Value

Full community matrix (sites x edges)

phylospatial documentation built on Dec. 24, 2025, 1:06 a.m.