plotMCMC: MCMC Diagnostic Plots
Version 2.0-0

Markov chain Monte Carlo diagnostic plots. The purpose of the package is to combine existing tools from the 'coda' and 'lattice' packages, and make it easy to adjust graphical details.

AuthorArni Magnusson [aut, cre], Ian Stewart [aut]
Date of publication2014-03-12 18:03:59
MaintainerArni Magnusson <arnima@hafro.is>
LicenseGPL (>= 2)
Version2.0-0
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("plotMCMC")

Getting started

Package overview

Popular man pages

plotAuto: Plot MCMC Autocorrelation
plotMCMC-package: MCMC Diagnostic Plots
plotSplom: Plot MCMC Scatterplot Matrix
xbio: MCMC Results for Biomass
xpar: MCMC Results for Model Parameters
xpro: MCMC Results for Future Projections
xrec: MCMC Results for Recruitment
See all...

All man pages Function index File listing

Man pages

plotAuto: Plot MCMC Autocorrelation
plotCumu: Plot MCMC Cumulative Quantiles
plotDens: Plot MCMC Density
plotMCMC-package: MCMC Diagnostic Plots
plotQuant: Plot MCMC Quantiles
plotSplom: Plot MCMC Scatterplot Matrix
plotTrace: Plot MCMC Traces
xbio: MCMC Results for Biomass
xpar: MCMC Results for Model Parameters
xpro: MCMC Results for Future Projections
xrec: MCMC Results for Recruitment

Functions

plotAuto Man page Source code
plotCumu Man page Source code
plotDens Man page Source code
plotMCMC Man page
plotMCMC-package Man page
plotQuant Man page Source code
plotSplom Man page Source code
plotTrace Man page Source code
xbio Man page
xpar Man page
xpro Man page
xrec Man page

Files

inst
inst/doc
inst/doc/gallery.Rnw
inst/doc/gallery.R
inst/doc/gallery.pdf
NAMESPACE
NEWS
data
data/xpro.rda
data/xrec.rda
data/xpar.rda
data/xbio.rda
R
R/plotDens.R
R/plotAuto.R
R/plotSplom.R
R/plotCumu.R
R/plotTrace.R
R/plotQuant.R
vignettes
vignettes/gallery.Rnw
MD5
build
build/vignette.rds
DESCRIPTION
man
man/plotQuant.Rd
man/plotAuto.Rd
man/plotCumu.Rd
man/xpro.Rd
man/plotTrace.Rd
man/plotDens.Rd
man/plotSplom.Rd
man/xrec.Rd
man/xbio.Rd
man/xpar.Rd
man/plotMCMC-package.Rd
plotMCMC documentation built on May 19, 2017, 8:51 a.m.

Questions? Problems? Suggestions? Tweet to @rdrrHQ or email at ian@mutexlabs.com.

Please suggest features or report bugs in the GitHub issue tracker.

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