Files in poems

Pattern-Oriented Ensemble Modeling System

MD5

NEWS.md README.md

NAMESPACE

DESCRIPTION

R/GenericManager.R R/population_dispersal.R R/LatinHypercubeSampler.R R/ResultsManager.R R/SimulatorReference.R R/Validator.R R/population_env_stoch.R R/PopulationModel.R R/population_density.R R/poems.R R/ModelSimulator.R R/GenerativeTemplate.R R/data.R R/SimulationResults.R R/Generator.R R/DispersalFriction.R R/Region.R R/PopulationResults.R R/GenericClass.R R/SimulationModel.R R/population_simulator.R R/population_transformation.R R/population_results.R R/SpatialModel.R R/population_transitions.R R/SimulationManager.R R/DispersalGenerator.R R/SpatialCorrelation.R R/GenericModel.R R/DispersalTemplate.R inst/doc/simple_example.pdf inst/doc/thylacine_example.R inst/doc/simple_example.Rmd inst/doc/translocation_example.Rmd inst/doc/simple_example.R inst/doc/translocation_example.pdf inst/doc/thylacine_example.Rmd inst/doc/translocation_example.R inst/doc/thylacine_example.pdf

build/vignette.rds

tests/testthat.R tests/testthat/test_population_model.R tests/testthat/test_population_results_class.R tests/testthat/test_generic_class.R tests/testthat/test_population_transformation_function.R tests/testthat/test_population_env_stoch_function.R tests/testthat/test_spatial_correlation.R tests/testthat/test_spatial_model.R tests/testthat/test_generator.R tests/testthat/test_population_transitions_function.R tests/testthat/test_generic_manager.R tests/testthat/test_model_simulator_class.R tests/testthat/test_population_dispersal_function.R tests/testthat/test_latin_hypercube_sampler.R tests/testthat/test_dispersal_generator.R tests/testthat/test_simulation_results.R tests/testthat/test_population_simulator_function.R tests/testthat/test_simulation_model.R tests/testthat/test_simulation_manager.R tests/testthat/test_region.R tests/testthat/test_population_density_function.R tests/testthat/test_simulator_reference.R tests/testthat/test_results_manager.R tests/testthat/test_validator.R tests/testthat/test_population_results_function.R tests/testthat/test_poems_workflow.R tests/testthat/test_dispersal_friction.R tests/testthat/test_generic_model.R

tests/testthat/test_inputs/Test_1_2.RData

tests/testthat/test_inputs/test_simulation_parameters.RData

tests/testthat/test_inputs/Test_1_2.gri

tests/testthat/test_inputs/test_abc_function.R tests/testthat/test_inputs/test_not_a_function.R

tests/testthat/test_inputs/Test_1_2.csv

tests/testthat/test_inputs/Test_1_2.grd

tests/testthat/test_inputs/test_function_1.R tests/testthat/test_inputs/test_metrics_function.R

tests/testthat/test_inputs/test_simulation_summary_metrics.csv

tests/testthat/test_inputs/test_invalid_code.R tests/testthat/test_inputs/test_function_0.R tests/testthat/test_inputs/test_function_2.R

tests/testthat/test_results/sample_2_results.RData

tests/testthat/test_results/sample_1_results.RData

tests/testthat/test_results/sample_3_results.RData

tests/testthat/test_results/raster/sample_1_raster_results.RData

tests/testthat/test_results/raster/sample_2_raster_results.RData

tests/testthat/test_results/raster/sample_3_raster_results.RData

vignettes/simple_example.Rmd vignettes/translocation_example.Rmd vignettes/thylacine_example.Rmd vignettes/workflow.pdf

data/tasmania_ibra_raster.rda

data/tasmania_modifier.rda

data/thylacine_example_matrices_rerun.rda

data/thylacine_hs_raster.rda

data/thylacine_example_matrices.rda

data/thylacine_example_metrics_rerun.rda

data/tasmania_raster.rda

data/tasmania_ibra_data.rda

data/thylacine_example_metrics.rda

data/thylacine_bounty_record.rda

man/SpatialCorrelation.Rd man/thylacine_hs_raster.Rd man/thylacine_example_matrices.Rd man/thylacine_example_metrics_rerun.Rd man/LatinHypercubeSampler.Rd man/Validator.Rd man/SimulationModel.Rd man/SimulatorReference.Rd man/PopulationResults.Rd man/DispersalTemplate.Rd man/tasmania_ibra_data.Rd man/population_dispersal.Rd man/thylacine_example_matrices_rerun.Rd man/GenerativeTemplate.Rd man/poems.Rd man/tasmania_raster.Rd man/population_results.Rd man/SimulationResults.Rd man/ResultsManager.Rd man/GenericClass.Rd man/Region.Rd man/population_simulator.Rd man/SimulationManager.Rd man/PopulationModel.Rd man/population_transformation.Rd man/SpatialModel.Rd man/Generator.Rd man/ModelSimulator.Rd man/GenericModel.Rd man/thylacine_example_metrics.Rd man/GenericManager.Rd man/DispersalGenerator.Rd man/thylacine_bounty_record.Rd man/tasmania_ibra_raster.Rd man/population_env_stoch.Rd man/population_transitions.Rd man/tasmania_modifier.Rd man/DispersalFriction.Rd man/population_density.Rd

man/figures/README-example-2.png

man/figures/README-example-1.png

man/figures/framework.pdf

man/figures/framework.png

poems documentation built on Oct. 7, 2023, 9:06 a.m.