Man pages for popgraph
This is an R package that constructs and manipulates population graphs.
| alt | Sonoran desert altitude. |
| arapat_mv | Araptus attenuatus data |
| arapat_pop | Arapat popualtion data |
| as.popgraph | Converts an object of type matrix or igraph into 'popgraph' |
| baja | Metadata for Baja Populations. |
| centroid_distance | This function takes a data set and a group set and returns... |
| centroid_variance | This function takes a data set and a group set and returns... |
| congruence_topology | Returns congruence topology |
| decorate_graph | Merge data into popgraph node-wise |
| geom_edgelabels | Plotting of a population graph edge labels using ggplot... |
| geom_edgeset | Plotting of a population graph edge set using ggplot neumonic |
| geom_nodeset | Plotting of a population graph edge set using ggplot neumonic |
| lopho | Lophocereus population graph |
| overlay_popgraph | Convience function to plot edges from 'popgraph' |
| permute_popgraph | Bootstraps indiviudals to see stability of graph topology. |
| popgraph | Default constructor for a 'PopulationGraph' object |
| popgraph-operator-minus | Overload '-' operator for pairs of 'popgraph' objects |
| popgraph-package | Package for the creation of population graph objects |
| read.popgraph | Reads in a population graph text file |
| test_congruence | Returns distance congruence between the two graphs |
| theme_empty | A blank theme for plotting networks |
| to_data.frame | Converts 'popgraph' to 'data.frame' based upon node... |
| to_html | Converts population graph to html file for interactive... |
| to_json | Converts to json representation |
| to_kml | Converts population graph to KML file |
| to_matrix | Matrix conversion for Population Graph |
| to_pgraph | Converts graph to a pgraph file format |
| to_SpatialLines | Converts edge set to SpatialLines object |
| to_SpatialPoints | Translate object into a SpatialPoints object |
| upiga | Upiga population graph |
| write_popgraph | Convience function for file exports |
