This is an R package that constructs and manipulates population graphs.

alt | Sonoran desert altitude. |

arapat_mv | Araptus attenuatus data |

arapat_pop | Arapat popualtion data |

as.popgraph | Converts an object of type matrix or igraph into 'popgraph' |

baja | Metadata for Baja Populations. |

centroid_distance | This function takes a data set and a group set and returns... |

centroid_variance | This function takes a data set and a group set and returns... |

congruence_topology | Returns congruence topology |

decorate_graph | Merge data into popgraph node-wise |

geom_edgelabels | Plotting of a population graph edge labels using ggplot... |

geom_edgeset | Plotting of a population graph edge set using ggplot neumonic |

geom_nodeset | Plotting of a population graph edge set using ggplot neumonic |

lopho | Lophocereus population graph |

overlay_popgraph | Convience function to plot edges from 'popgraph' |

permute_popgraph | Bootstraps indiviudals to see stability of graph topology. |

popgraph | Default constructor for a 'PopulationGraph' object |

popgraph-operator-minus | Overload '-' operator for pairs of 'popgraph' objects |

popgraph-package | Package for the creation of population graph objects |

read.popgraph | Reads in a population graph text file |

test_congruence | Returns distance congruence between the two graphs |

theme_empty | A blank theme for plotting networks |

to_data.frame | Converts 'popgraph' to 'data.frame' based upon node... |

to_html | Converts population graph to html file for interactive... |

to_json | Converts to json representation |

to_kml | Converts population graph to KML file |

to_matrix | Matrix conversion for Population Graph |

to_pgraph | Converts graph to a pgraph file format |

to_SpatialLines | Converts edge set to SpatialLines object |

to_SpatialPoints | Translate object into a SpatialPoints object |

upiga | Upiga population graph |

write_popgraph | Convience function for file exports |

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