crodesign: Generate Mating Design

In predhy: Genomic Prediction of Hybrid Performance

Generate Mating Design

Description

Generate a mating design for a subset of crosses based on a balanced random partial rectangle cross-design (BRPRCD) (Xu et al. 2016).

Usage

crodesign(d, male_name, female_name, seed = 123)

Arguments

d	an integer denoting 1/d percentage of crosses to be evaluated in the field.
male_name	a character string for the names of male parents.
female_name	a character string for the names of male parents.
seed	the random number, default is 123.

Value

A data frame of mating design result with three columns. The first column is "crossID", the second column is the "male_Name" and the third column is the "female_Name".

References

Xu S, Xu Y, Gong L and Zhang Q. (2016) Metabolomic prediction of yield in hybrid rice. Plant J. 88, 219-227.

Examples

## generate a mating design with 100 male parents and 150 female parents
## for 1/d = 1/50 percentage of crosses to be evaluated in the field.
## the total number of potential crosses is 100*150 = 15000.
## The number of crosses to be field evaluated is 15000*(1/50) = 300.

male_name <- paste("m", 1:100, sep = "")
female_name <- paste("f", 1:150, sep = "")
design <- crodesign(d = 50, male_name, female_name)

predhy documentation built on Nov. 10, 2022, 6:13 p.m.