Predicting Species Accumulation Curves

bbc.rSAC | BBC estimator |

cs.rSAC | CS estimator |

Dickens | Dickens' vocabulary |

ds.rSAC | RFA estimator |

ds.rSAC.bootsrap | RFA estimator with bootstrap |

fisher.alpha | Parameter alpha in the logseries estimator |

FisherButterfly | Fisher's butterfly data |

fisher.rSAC | Logseries estimator |

kmer.frac.curve | Fraction of k-mers observed at least r times |

kmer.frac.curve.bootstrap | Fraction of k-mers observed at least r times with bootstrap |

preseqR.interpolate.rSAC | Interpolation |

preseqR.nonreplace.sampling | Sampling |

preseqR.optimal.sequencing | Optimal amount of sequencing for scWGS |

preseqR.package | Predicting r-species accumulation curves |

preseqR.rSAC | Best practice for r-SAC - a fast version |

preseqR.rSAC.bootstrap | Best practice for r-SAC |

preseqR.rSAC.sequencing.rmdup | Predicting r-SAC in WES/WGS |

preseqR.sample.cov | Predicting generalized sample coverage |

preseqR.sample.cov.bootstrap | Predicting generalized sample coverage with bootstrap |

preseqR.simu.hist | Simulation |

preseqR.ztnb.em | Fitting a zero-truncated negative binomial distribution |

Shakespeare | Shakespeare's word type frequencies |

SRR061157_k31 | k-mer counts of a metagenomic data |

SRR1301329_1M_base | Coverage histogram of a WES data |

SRR1301329_1M_read | Read counts of a WES data |

SRR1301329_base | Coverage histogram of a WES data |

SRR1301329_read | Read counts of a WES data |

SRR611492 | Coverage histogram of a scWGS data |

SRR611492_5M | Coverage histogram of a scWGS data |

Social network | |

WillButterfly | Fisher's butterfly data |

ztnb.rSAC | ZTNB estimator |

ztp.rSAC | ZTP estimator |

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