preseqR.package: Predicting r-species accumulation curves

Description Details Author(s) References


The functionality of this package is to predict r-species accumulaiton curves. The method is based on a nonparametric empirical Bayes approach with rational function approximation. The estimator is excellent in accuracy for both large values of r and long-range extrapolations, which are essential to large-scale applications. Some examples are predicting the molecular complexity of sequencing libraries, estimating the minimum sufficient sequencing depths for whole-exome sequencing experiments and optimizing depths for single-cell whole-genome sequencing experiments.


main functions:








Chao Deng, Timothy Daley, and Andrew D. Smith

Maintainer: Chao Deng <>


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preseqR documentation built on May 2, 2019, 6:39 a.m.