Systematic Conservation Prioritization in R

add_absolute_targets | Add Absolute Targets |

add_binary_decisions | Add Binary Decisions |

add_boundary_penalties | Add boundary penalties |

add_connected_constraints | Add connected constraints |

add_connectivity_penalties | Add connectivity penalties |

add_corridor_constraints | Add corridor constraints |

add_cuts_portfolio | Add a Bender's cuts portfolio |

add_default_decisions | Add default decisions |

add_default_solver | Default solver |

add_feature_weights | Add feature weights |

add_gurobi_solver | Add a Gurobi solver |

add_locked_in_constraints | Add locked in constraints |

add_locked_out_constraints | Add locked out constraints |

add_loglinear_targets | Add Loglinear Targets |

add_lsymphony_solver | Add a SYMPHONY solver with lpsymphony |

add_max_cover_objective | Add Maximum Coverage Objective |

add_max_features_objective | Add Maximum Feature Representation Objective |

add_max_phylo_objective | Add Maximum Phylogenetic Representation Objective |

add_max_utility_objective | Add Maximum Utility Objective |

add_min_set_objective | Add Minimum Set Objective |

add_neighbor_constraints | Add neighbor constraints |

add_proportion_decisions | Add Proportion Decisions |

add_relative_targets | Add Relative Targets |

add_rsymphony_solver | Add a SYMPHONY solver with Rsymphony |

add_semicontinuous_decisions | Add semi-continuous decisions |

add_shuffle_portfolio | Add a shuffle portfolio |

ArrayParameter-class | Array Parameter prototype |

array_parameters | Array parameters |

as | Coerce object to another object |

as.list | Convert 'OptimizationProblem' to list |

boundary_matrix | Boundary matrix |

branch_matrix | Branch matrix |

Collection-class | Collection prototype |

compile | Compile a problem |

connected_matrix | Connected matrix |

connectivity_matrix | Connectivity matrix |

ConservationModifier-class | Conservation problem modifier prototype |

ConservationProblem-class | Conservation problem class |

Constraint-class | Constraint prototype |

constraints | Conservation problem constraints |

Decision-class | Decision prototype |

decisions | Specify the type of decisions |

distribute_load | Distribute load |

fast_extract | Fast extract |

intersecting_units | Find intersecting units |

is | Is it? |

is.parallel | Is parallel? |

marxan_problem | Marxan conservation problem |

new_id | Identifier |

new_optimization_problem | Optimization problem |

new_waiver | Waiver |

Objective-class | Objective prototype |

objectives | Problem objective |

OptimizationProblem-class | Optimization problem class |

OptimizationProblem-methods | Optimization problem methods |

parallel | Number of threads for data processing |

Parameter-class | Parameter class |

parameters | Parameters |

Parameters-class | Parameters class |

penalties | Conservation problem penalties |

Penalty-class | Penalty prototype |

pipe | Pipe operator |

Portfolio-class | Portfolio prototype |

portfolios | Solution portfolio methods |

pproto | Create a new 'pproto' object |

predefined_optimization_problem | Predefined optimization problem |

prioritizr | prioritizr |

problem | Conservation planning problem |

rij_matrix | Feature by planning unit matrix |

run_calculations | Run calculations |

ScalarParameter-class | Scalar Parameter prototype |

scalar_parameters | Scalar parameters |

show | Show |

sim_data | Simulated conservation planning data |

simulate_cost | Simulate cost data |

simulate_data | Simulate data |

simulate_species | Simulate species habitat suitabilities |

solve | Solve a problem |

Solver-class | Solver prototype |

solvers | Problem solvers |

Target-class | Target prototype |

targets | Targets |

tee | Tee operator |

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