Files in prioritizr
Systematic Conservation Prioritization in R

NAMESPACE
README.md
MD5
DESCRIPTION
src/Makevars
src/rcpp_apply_neighbor_constraints.cpp
src/rcpp_apply_asymmetric_boundary_constraints.cpp
src/optimization_problem.h
src/rcpp_apply_locked_out_constraints.cpp
src/rcpp_boundary_data.h
src/optimization_problem.cpp
src/rcpp_sp_to_polyset.cpp
src/rcpp_apply_max_cover_objective.cpp
src/rcpp_list_to_matrix_indices.cpp
src/rcpp_apply_corridor_constraints.cpp
src/rcpp_apply_max_features_objective.cpp
src/rcpp_apply_decisions.cpp
src/RcppExports.cpp
src/rcpp_apply_connected_constraints.cpp
src/rcpp_apply_max_phylo_objective.cpp
src/rcpp_apply_feature_weights.cpp
src/rcpp_add_rij_data.cpp
src/functions.cpp
src/rcpp_forbid_solution.cpp
src/rcpp_apply_locked_in_constraints.cpp
src/rcpp_apply_min_set_objective.cpp
src/package.h
src/functions.h
src/rcpp_apply_symmetric_boundary_constraints.cpp
src/rcpp_boundary_data.cpp
src/init.c
src/rcpp_apply_max_utility_objective.cpp
src/rcpp_branch_matrix.cpp
src/Makevars.win
tests/testthat.R tests/testthat/test_add_min_set_objective.R tests/testthat/test_parallel.R tests/testthat/test_intersecting_units.R tests/testthat/test_add_locked_in_constraints.R tests/testthat/test_connected_matrix.R tests/testthat/test_Waiver.R tests/testthat/test_connectivity_matrix.R tests/testthat/test_boundary_matrix.R tests/testthat/test_solve.R tests/testthat/test_add_corridor_constraints.R tests/testthat/test_OptimizationProblem.R tests/testthat/test_add_max_cover_objective.R tests/testthat/test_marxan_problem.R tests/testthat/test_add_locked_out_constraints.R tests/testthat/test_add_connectivity_penalties.R tests/testthat/test_branch_matrix.R tests/testthat/test_rij_matrix.R tests/testthat/test_add_connected_constraints.R tests/testthat/test_simulate.R tests/testthat/test_add_max_utility_objective.R tests/testthat/test_parameters.R tests/testthat/test_add_neighbor_constraints.R tests/testthat/test_add_shuffle_portfolio.R tests/testthat/test_pproto.R tests/testthat/test_add_max_phylo_objective.R tests/testthat/test_decisions.R tests/testthat/test_add_max_features_objective.R tests/testthat/test_Id.R tests/testthat/test_sp_to_polyset.R tests/testthat/test_add_cuts_portfolio.R tests/testthat/test_problem.R tests/testthat/test_add_boundary_penalties.R tests/testthat/test_solvers.R
build/vignette.rds
R/add_rsymphony_solver.R R/constraints.R R/ConservationProblem-proto.R R/add_connectivity_penalties.R R/Solver-proto.R R/Penalty-proto.R R/add_shuffle_portfolio.R R/add_proportion_decisions.R R/run_calculations.R R/connectivity_matrix.R R/add_loglinear_targets.R R/add_corridor_constraints.R R/pproto.R R/solvers.R R/Target-proto.R R/problem.R R/add_gurobi_solver.R R/add_neighbor_contraints.R R/add_default_decisions.R R/solve.R R/internal.R R/add_max_features_objective.R R/parallel.R R/portfolios.R R/add_max_utility_objective.R R/add_max_phylo_objective.R R/add_boundary_penalties.R R/add_default_solver.R R/add_default_targets.R R/waiver.R R/add_absolute_targets.R R/add_binary_decisions.R R/add_connected_constraints.R R/Id.R R/add_cuts_portfolio.R R/intersecting_units.R R/connected_matrix.R R/ConservationModifier-proto.R R/magrittr-operators.R R/add_min_set_objective.R R/package.R R/Portfolio-proto.R R/add_lpsymphony_solver.R R/Objective-proto.R R/add_default_portfolio.R R/ArrayParameter-proto.R R/RcppExports.R R/add_relative_targets.R R/Parameters-proto.R R/add_default_objective.R R/Parameter-proto.R R/OptimizationProblem-proto.R R/simulate.R R/rij_matrix.R R/compile.R R/targets.R R/branch_matrix.R R/misc.R R/decisions.R R/boundary_matrix.R R/add_feature_weights.R R/add_locked_in_constraints.R R/data.R R/ScalarParameter-proto.R R/Decision-proto.R R/Collection-proto.R R/marxan_problem.R R/Constraint-proto.R R/add_semicontinuous_decisions.R R/parameters.R R/OptimizationProblem-methods.R R/zzz.R R/objectives.R R/penalties.R R/add_locked_out_constraints.R R/fast_extract.R R/add_max_cover_objective.R
inst/extdata/input.dat
inst/extdata/simulate_data.R
inst/extdata/input/spec.dat
inst/extdata/input/puvspr.dat
inst/extdata/input/pu.dat
inst/extdata/input/bound.dat
inst/doc/publication_record.html
inst/doc/prioritizr_basics.Rmd inst/doc/gurobi_installation.Rmd inst/doc/quick_start.Rmd
inst/doc/quick_start.html
inst/doc/prioritizr_basics.html
inst/doc/gurobi_installation.html
inst/doc/publication_record.Rmd
data/sim_phylogeny.rda
data/sim_pu_raster.rda
data/sim_pu_lines.rda
data/sim_pu_points.rda
data/sim_locked_in_raster.rda
data/sim_pu_polygons.rda
data/sim_features.rda
data/sim_locked_out_raster.rda
man/branch_matrix.Rd man/add_cuts_portfolio.Rd man/show.Rd man/add_max_utility_objective.Rd man/intersecting_units.Rd man/boundary_matrix.Rd man/add_default_solver.Rd man/Collection-class.Rd man/add_lsymphony_solver.Rd man/pproto.Rd man/add_corridor_constraints.Rd man/add_feature_weights.Rd man/prioritizr.Rd man/ArrayParameter-class.Rd man/ConservationModifier-class.Rd man/predefined_optimization_problem.Rd man/fast_extract.Rd man/add_gurobi_solver.Rd man/portfolios.Rd man/new_id.Rd man/compile.Rd man/add_boundary_penalties.Rd man/Portfolio-class.Rd man/connectivity_matrix.Rd man/Objective-class.Rd man/sim_data.Rd man/decisions.Rd man/distribute_load.Rd man/add_connectivity_penalties.Rd man/ConservationProblem-class.Rd man/as.list.Rd man/new_optimization_problem.Rd man/add_proportion_decisions.Rd man/print.Rd man/rij_matrix.Rd man/add_absolute_targets.Rd man/add_max_features_objective.Rd man/OptimizationProblem-class.Rd man/Decision-class.Rd man/add_semicontinuous_decisions.Rd man/Penalty-class.Rd man/add_max_phylo_objective.Rd man/Target-class.Rd man/Parameters-class.Rd man/pipe.Rd man/new_waiver.Rd man/problem.Rd man/add_binary_decisions.Rd man/array_parameters.Rd man/OptimizationProblem-methods.Rd man/add_max_cover_objective.Rd man/add_locked_in_constraints.Rd man/is.parallel.Rd man/Constraint-class.Rd man/run_calculations.Rd man/as.Rd man/add_connected_constraints.Rd man/add_locked_out_constraints.Rd man/add_loglinear_targets.Rd man/Parameter-class.Rd man/targets.Rd man/add_relative_targets.Rd man/penalties.Rd man/simulate_data.Rd man/tee.Rd man/add_neighbor_constraints.Rd man/Solver-class.Rd man/add_rsymphony_solver.Rd man/objectives.Rd man/add_default_decisions.Rd man/add_shuffle_portfolio.Rd man/solvers.Rd man/is.Rd man/connected_matrix.Rd man/parallel.Rd man/add_min_set_objective.Rd man/ScalarParameter-class.Rd man/solve.Rd man/simulate_species.Rd man/marxan_problem.Rd man/scalar_parameters.Rd man/constraints.Rd man/parameters.Rd man/simulate_cost.Rd
man/figures/README-unnamed-chunk-13-1.png
man/figures/README-unnamed-chunk-8-1.png
man/figures/README-unnamed-chunk-12-1.png
man/figures/README-unnamed-chunk-11-1.png
man/figures/README-unnamed-chunk-6-1.png
man/figures/README-unnamed-chunk-10-1.png
man/figures/README-unnamed-chunk-7-1.png
man/figures/logo.png
vignettes/prioritizr_basics.Rmd vignettes/gurobi_installation.Rmd vignettes/publication_record.Rmd vignettes/quick_start.Rmd
vignettes/figures/cmd-windows-success.png
vignettes/figures/free-academic-license-page.png
vignettes/figures/model-test.png
vignettes/figures/actual-license.png
prioritizr documentation built on Nov. 22, 2017, 5:02 p.m.