pub_tabularize: Tabularize chunks output

In pubchunks: Fetch Sections of XML Scholarly Articles

Description

Tabularize chunks output

Usage

pub_tabularize(x, bind = FALSE)

Arguments

x	the output of pub_chunks()
bind	(logical) whether to bind list of data.frames or not. ignored unless list input to x. default: FALSE

Value

a data.frame or list

Examples

## Not run: 
# one at a time
## example 1, a file path
x <- system.file("examples/elife_1.xml", package = "pubchunks")
(res <- pub_chunks(x, c("doi", "title", "keywords")))
pub_tabularize(res)

## example 2, a file path
y <- system.file("examples/frontiers_1.xml", package = "pubchunks")
(res2 <- pub_chunks(y, c("doi", "title", "keywords")))
pub_tabularize(res2)

# > 1, a list of file paths
x <- system.file("examples/elife_1.xml", package = "pubchunks")
y <- system.file("examples/frontiers_1.xml", package = "pubchunks")
(res <- pub_chunks(list(x, y), c("doi", "title", "keywords")))
pub_tabularize(res)
pub_tabularize(res, bind = TRUE)

# using output of fulltext::ft_get()
if (requireNamespace("fulltext", quietly = TRUE)) {
  dois <- c('10.1371/journal.pone.0086169', '10.1371/journal.pone.0155491', 
    '10.7554/eLife.03032')
  x <- fulltext::ft_get(dois)
  (tmp <- pub_chunks(fulltext::ft_collect(x), sections=c("doi","title")))
  pub_tabularize(tmp)
  pub_tabularize(tmp, bind = TRUE)
}
## End(Not run)

pubchunks documentation built on Sept. 4, 2020, 5:06 p.m.