Man pages for pulseTD
Identification of Transcriptional Dynamics using Pulse Models via 4su-Seq Data and RNA-Seq Data

correctionParamsCorrect the parameters of the pulse model
estimateExpressionEstimated Expression
estimateParamsEstimated pulse model parameters!
getParamsGet pulseModel params
getParams-pulseTDmodel-methodgetParams-method
getRatesGet rate values
getRates-pulseTDmodel-methodgetRates-method
integrateAintegral function
integrateACintegral function
plotRatesdraw Method
plotRates-pulseTDmodel-methodplotRate-Method
predictExpressionpredict Expression
predictExpression-pulseTDmodel-methodpredictExpression-method
preExpA gene list that stores predicted values of gene expression...
pulseModelpulse function
pulseRatesA pulseTDModel Rdata file containing 100 gene expression...
pulseTDmodel-classpulseTD-model
rpkmresa list containing the expression values of exons and introns
rpkmSimA simulated gene expressing Rdata file that contains...
splitA6Paramsesitmate transcription parameters
splitB4Paramsesitmate degradation parameters
splitC5Paramsesitmate processing parameters
pulseTD documentation built on May 17, 2019, 5:03 p.m.