Files in purgeR
Inbreeding-Purging Estimation in Pedigreed Populations
MD5
NEWS.md
NAMESPACE
DESCRIPTION
R/RcppExports.R
R/partial.R
R/rename.R
R/check.R
R/expected.R
R/data.R
R/sort.R
R/clean.R
R/generations.R
R/mating.R
R/Nancestors.R
R/igraph.R
R/maternal.R
R/Ne.R
R/inbreeding.R
R/import.R
R/zzz.R
R/purgeR.R
R/fitness.R
R/opurging.R
src/inbreeding_utils.cpp
src/RcppExports.cpp
src/opurging.cpp
src/inbreeding.cpp
src/genedrop.h
src/error.h
src/populationSize.cpp
src/partial.cpp
src/utils.h
src/partial.h
src/inbreeding_utils.h
src/constants.h
src/mating.cpp
src/genedrop.cpp
src/fitness.cpp
inst/CITATION
inst/doc/purgeR-tutorial.Rmd
inst/doc/ip.Rmd
inst/doc/ip.R
inst/doc/purgeR-tutorial.html
inst/doc/ip.html
inst/doc/purgeR-tutorial.R
inst/extdata/posterior.rda
inst/extdata/pim.rda
inst/extdata/arrui_op.rda
inst/extdata/dama_rv.rda
build/vignette.rds
tests/testthat.R
tests/testthat/test_expected.R
tests/testthat/test_fitness.R
tests/testthat/test_preprocessing.R
tests/testthat/test_missuse.R
tests/testthat/test_population_parameters.R
tests/testthat/test_inbreeding.R
vignettes/purgeR-tutorial.Rmd
vignettes/ip.Rmd
data/datalist
data/darwin.rda
data/atlas.rda
data/dorcas.rda
data/arrui.rda
data/dama.rda
man/dama.Rd
man/check_Fcol.Rd
man/check_names.Rd
man/Fij_core_i_cpp.Rd
man/check_nrows.Rd
man/Ne_delta.Rd
man/exp_g.Rd
man/idx_ancestors.Rd
man/dorcas.Rd
man/check_Ne.Rd
man/check_col.Rd
man/ped_maternal.Rd
man/w_offspring.Rd
man/check_int.Rd
man/op.Rd
man/ip_Fij.Rd
man/check_basic.Rd
man/darwin.Rd
man/ped_sort.Rd
man/search_ancestors.Rd
man/atlas.Rd
man/delta_Fi.Rd
man/check_order.Rd
man/hwd.Rd
man/map_ancestors.Rd
man/check_df.Rd
man/check_types.Rd
man/ip_op.Rd
man/Fij_core.Rd
man/check_tcol.Rd
man/arrui.Rd
man/ip_g.Rd
man/check_d.Rd
man/pop_Ne.Rd
man/check_length.Rd
man/check_na.Rd
man/exp_Fa.Rd
man/ped_graph.Rd
man/check_reference.Rd
man/purgeR.Rd
man/pop_Nancestors.Rd
man/ped_rename.Rd
man/check_bool.Rd
man/sample_allele.Rd
man/pop_t.Rd
man/check_repeat_id.Rd
man/check_ancestors.Rd
man/exp_F.Rd
man/pop_hwd.Rd
man/ip_F.Rd
man/Fa.Rd
man/check_not_col.Rd
man/check_index.Rd
man/g.Rd
man/w_reproductive_value.Rd
man/reproductive_value.Rd
man/ped_sort_i.Rd
man/F.Rd
man/ip_Fa.Rd
man/check_zero_id.Rd
man/w_grandoffspring.Rd
man/ancestors.Rd
man/ped_clean.Rd
