qtlpoly: Random-Effect Multiple QTL Mapping in Autopolyploids

Performs random-effect multiple interval mapping (REMIM) in full-sib families of autopolyploid species based on restricted maximum likelihood (REML) estimation and score statistics, as described in Pereira et al. (2020) <doi:10.1534/genetics.120.303080>.

Getting started

Package details

AuthorGuilherme da Silva Pereira [aut] (<https://orcid.org/0000-0002-7106-8630>), Marcelo Mollinari [ctb] (<https://orcid.org/0000-0002-7001-8498>), Gabriel de Siqueira Gesteira [ctb, cre] (<https://orcid.org/0000-0002-4106-7346>), Zhao-Bang Zeng [ctb] (<https://orcid.org/0000-0002-3115-1149>), Long Qu [ctb] (R code for variance component tests using score statistics in R/varComp.R), Giovanny Covarrubias-Pazaran [ctb] (C code for fitting mixed models with REML estimation in src/MNR.cpp)
MaintainerGabriel de Siqueira Gesteira <gdesiqu@ncsu.edu>
LicenseGPL-3
Version0.2.4
URL https://gabrielgesteira.github.io/QTLpoly/
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("qtlpoly")

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qtlpoly documentation built on May 29, 2024, 2:14 a.m.