maps6x: Simulated autohexaploid map

In qtlpoly: Random-Effect Multiple QTL Mapping in Autopolyploids

Description

A simulated map containing three homology groups of a hypotetical cross between two autohexaploid individuals.

Usage

maps6x

Format

An object of class "mappoly.map" from the package mappoly, which is a list of three linkage groups (LGs):

LG 1

538 markers distributed along 112.2 cM

LG 2

329 markers distributed along 54.6 cM

LG 3

443 markers distributed along 98.2 cM

Author(s)

Marcelo Mollinari, [e-mail]

References

Pereira GS, Gemenet DC, Mollinari M, Olukolu BA, Wood JC, Mosquera V, Gruneberg WJ, Khan A, Buell CR, Yencho GC, Zeng ZB (2019) Multiple QTL mapping in autopolyploids: a random-effect model approach with application in a hexaploid sweetpotato full-sib population, Genetics 215 (3): 579-595. doi: 10.1534/genetics.120.303080.

Mollinari M, Garcia AAF (2019) Linkage analysis and haplotype phasing in experimental autopolyploid populations with high ploidy level using hidden Markov models, G3: Genes|Genomes|Genetics 9 (10): 3297-3314. doi: 10.1534/g3.119.400378

See Also

hexafake, pheno6x

Examples

library(mappoly)
plot_map_list(maps6x)

qtlpoly documentation built on Jan. 12, 2022, 5:06 p.m.