get_sample_locations: Get the well locations of the samples used in the RT-QuIC...

In quicR: RT-QuIC Data Formatting and Analysis

Get the well locations of the samples used in the RT-QuIC run.

Description

Returns a dataframe with the sample IDs and well IDs used in the plate.

Usage

get_sample_locations(
  file,
  tab_name = "Sample IDs",
  dilution_bool = FALSE,
  dilution_fun = function(x) 1 * x,
  sep = "\n",
  plate = 96
)

Arguments

file	Excel file exported from MARS
tab_name	Table name containing the sample IDs.
dilution_bool	Logical; is there a table containing dilution factors? If so, will add a newline and the log of the dilution factor to the ID column.
dilution_fun	A function for transforming the dilution factor.
sep	A string used to separate the sample ID and dilution factor.
plate	Integer; either 96 or 384 to denote microplate type.

Value

A vector containing well IDs.

Examples

file <- system.file(
  "extdata/input_files",
  file = "test.xlsx",
  package = "quicR"
)
get_sample_locations(file)

quicR documentation built on April 3, 2025, 11:20 p.m.