| ENAset | R Documentation |
ENAset R6class
ENAset R6class
enadataAn ENAdata object originally used to create the set
points.rawA data frame containing accumulated adjacency (co-occurrence) vectors per unit
points.normed.centeredA data frame of centered normed accumulated adjacency (co-occurrence) vectors for each unit
points.rotatedA data frame of point positions for number of dimensions specified in ena.make.set (i.e., the centered, normed, and rotated data)
line.weightsA data frame of connections strengths per unit (Data frame of normed accumu- lated adjacency (co-occurrence) vectors for each unit)
node.positions- A data frame of positions for each code
codes- A vector of code names
rotation.set- An ENARotationSet object
variance- A vector of variance accounted for by each dimension specified
centroids- A matrix of the calculated centroid positions
function.call- The string representation of function called
function.params- A list of all parameters sent to function call
rotation_distsTBD
points.rotated.scaledTBD
points.rotated.non.zeroTBD
line.weights.unrotatedTBD
line.weights.non.zeroTBD
correlationsA data frame of spearman and pearson correlations for each dimension specified
center.align.to.origin- align point and centroid centers to origin Create ENAset
new()ENAset$new( enadata, dimensions = 2, norm.by = fun_sphere_norm, rotation.by = ena.svd.R6, rotation.params = NULL, rotation.set = NULL, node.position.method = lws.positions.sq.R6, endpoints.only = TRUE, center.align.to.origin = TRUE, ... )
enadataTBD
dimensionsTBD
norm.byTBD
rotation.byTBD
rotation.paramsTBD
rotation.setTBD
node.position.methodTBD
endpoints.onlyTBD
center.align.to.originTBD
...TBD
ENAset Process ENAset
process()ENAset$process()
ENASet Get property from object
get()ENAset$get(x = "enadata")
xcharacter key to retrieve from object
value from object at x
clone()The objects of this class are cloneable with this method.
ENAset$clone(deep = FALSE)
deepWhether to make a deep clone.
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