Nothing
library(rearrr)
context("rev_windows()")
test_that("fuzz testing rev_windows()", {
xpectr::set_test_seed(42)
# Create a data frame
df_length <- 12
df <- data.frame(
"index" = 1:df_length,
"A" = sample(1:df_length),
"G" = rep(c(1, 2), each = df_length/2),
"G_index" = rep(1:(df_length/2), times = 2),
stringsAsFactors = FALSE
)
# Generate expectations for 'rev_windows'
# Tip: comment out the gxs_function() call
# so it is easy to regenerate the tests
xpectr::set_test_seed(42)
# xpectr::gxs_function(
# fn = rev_windows,
# args_values = list(
# "data" = list(df, dplyr::group_by(df, G), 1:10, -3:3, NA),
# "window_size" = list(3, 2, 0, 13, NA),
# "factor_name" = list(NULL, ".window", NA, 1),
# "overwrite" = list(TRUE, NA)
# ),
# extra_combinations = list(
# list("data" = dplyr::group_by(df, G), "window_size" = 4),
# list("factor_name" = "A", "overwrite" = FALSE)
# ),
# indentation = 2
# )
## Testing 'rev_windows' ####
## Initially generated by xpectr
# Testing different combinations of argument values
# Testing rev_windows(data = df, window_size = 3, fact...
xpectr::set_test_seed(42)
# Assigning output
output_19148 <- rev_windows(data = df, window_size = 3, factor_name = NULL, overwrite = TRUE)
# Testing class
expect_equal(
class(output_19148),
c("tbl_df", "tbl", "data.frame"),
fixed = TRUE)
# Testing column values
expect_equal(
output_19148[["index"]],
c(3, 2, 1, 6, 5, 4, 9, 8, 7, 12, 11, 10),
tolerance = 1e-4)
expect_equal(
output_19148[["A"]],
c(3, 12, 11, 4, 6, 8, 10, 1, 5, 2, 9, 7),
tolerance = 1e-4)
expect_equal(
output_19148[["G"]],
c(1, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2, 2),
tolerance = 1e-4)
expect_equal(
output_19148[["G_index"]],
c(3, 2, 1, 6, 5, 4, 3, 2, 1, 6, 5, 4),
tolerance = 1e-4)
# Testing column names
expect_equal(
names(output_19148),
c("index", "A", "G", "G_index"),
fixed = TRUE)
# Testing column classes
expect_equal(
xpectr::element_classes(output_19148),
c("integer", "integer", "numeric", "integer"),
fixed = TRUE)
# Testing column types
expect_equal(
xpectr::element_types(output_19148),
c("integer", "integer", "double", "integer"),
fixed = TRUE)
# Testing dimensions
expect_equal(
dim(output_19148),
c(12L, 4L))
# Testing group keys
expect_equal(
colnames(dplyr::group_keys(output_19148)),
character(0),
fixed = TRUE)
# Testing rev_windows(data = dplyr::group_by(df, G), w...
# Changed from baseline: data = dplyr::group_b...
xpectr::set_test_seed(42)
# Assigning output
output_19370 <- rev_windows(data = dplyr::group_by(df, G), window_size = 3, factor_name = NULL, overwrite = TRUE)
# Testing class
expect_equal(
class(output_19370),
c("tbl_df", "tbl", "data.frame"),
fixed = TRUE)
# Testing column values
expect_equal(
output_19370[["index"]],
c(3, 2, 1, 6, 5, 4, 9, 8, 7, 12, 11, 10),
tolerance = 1e-4)
expect_equal(
output_19370[["A"]],
c(3, 12, 11, 4, 6, 8, 10, 1, 5, 2, 9, 7),
tolerance = 1e-4)
expect_equal(
output_19370[["G"]],
c(1, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2, 2),
tolerance = 1e-4)
expect_equal(
output_19370[["G_index"]],
c(3, 2, 1, 6, 5, 4, 3, 2, 1, 6, 5, 4),
tolerance = 1e-4)
# Testing column names
expect_equal(
names(output_19370),
c("index", "A", "G", "G_index"),
fixed = TRUE)
# Testing column classes
expect_equal(
xpectr::element_classes(output_19370),
c("integer", "integer", "numeric", "integer"),
fixed = TRUE)
# Testing column types
expect_equal(
xpectr::element_types(output_19370),
c("integer", "integer", "double", "integer"),
fixed = TRUE)
# Testing dimensions
expect_equal(
dim(output_19370),
c(12L, 4L))
# Testing group keys
expect_equal(
colnames(dplyr::group_keys(output_19370)),
character(0),
fixed = TRUE)
# Testing rev_windows(data = 1:10, window_size = 3, fa...
# Changed from baseline: data = 1:10
xpectr::set_test_seed(42)
# Assigning output
output_12861 <- rev_windows(data = 1:10, window_size = 3, factor_name = NULL, overwrite = TRUE)
# Testing class
expect_equal(
class(output_12861),
"integer",
fixed = TRUE)
# Testing type
expect_type(
output_12861,
type = "integer")
# Testing values
expect_equal(
output_12861,
c(3, 2, 1, 6, 5, 4, 9, 8, 7, 10),
tolerance = 1e-4)
# Testing names
expect_equal(
names(output_12861),
NULL,
fixed = TRUE)
# Testing length
expect_equal(
length(output_12861),
10L)
# Testing sum of element lengths
expect_equal(
sum(xpectr::element_lengths(output_12861)),
10L)
# Testing rev_windows(data = -3:3, window_size = 3, fa...
# Changed from baseline: data = -3:3
xpectr::set_test_seed(42)
# Assigning output
output_18304 <- rev_windows(data = -3:3, window_size = 3, factor_name = NULL, overwrite = TRUE)
# Testing class
expect_equal(
class(output_18304),
"integer",
fixed = TRUE)
# Testing type
expect_type(
output_18304,
type = "integer")
# Testing values
expect_equal(
output_18304,
c(-1, -2, -3, 2, 1, 0, 3),
tolerance = 1e-4)
# Testing names
expect_equal(
names(output_18304),
NULL,
fixed = TRUE)
# Testing length
expect_equal(
length(output_18304),
7L)
# Testing sum of element lengths
expect_equal(
sum(xpectr::element_lengths(output_18304)),
7L)
# Testing rev_windows(data = NA, window_size = 3, fact...
# Changed from baseline: data = NA
xpectr::set_test_seed(42)
# Testing side effects
# Assigning side effects
side_effects_16417 <- xpectr::capture_side_effects(rev_windows(data = NA, window_size = 3, factor_name = NULL, overwrite = TRUE), reset_seed = TRUE)
expect_equal(
xpectr::strip(side_effects_16417[['error']]),
xpectr::strip(ifelse(
is_checkmate_v2_1(),
"Assertion failed. One of the following must apply:\n * checkmate::check_data_frame(data): Must be of type 'data.frame', not 'logical'\n * checkmate::check_vector(data): Contains missing values (element 1)\n * checkmate::check_factor(data): Must be of type 'factor', not 'logical'",
"Assertion failed. One of the following must apply:\n * checkmate::check_data_frame(data): Must be of type 'data.frame', not 'logical'\n * checkmate::check_vector(data): Contains missing values (element 1)\n * checkmate::check_factor(data): Contains missing values (element 1)"
)),
fixed = TRUE)
expect_equal(
xpectr::strip(side_effects_16417[['error_class']]),
xpectr::strip(c("simpleError", "error", "condition")),
fixed = TRUE)
# Testing rev_windows(data = NULL, window_size = 3, fa...
# Changed from baseline: data = NULL
xpectr::set_test_seed(42)
# Testing side effects
# Assigning side effects
side_effects_15190 <- xpectr::capture_side_effects(rev_windows(data = NULL, window_size = 3, factor_name = NULL, overwrite = TRUE), reset_seed = TRUE)
expect_equal(
xpectr::strip(side_effects_15190[['error']]),
xpectr::strip("Assertion failed. One of the following must apply:\n * checkmate::check_data_frame(data): Must be of type 'data.frame', not 'NULL'\n * checkmate::check_vector(data): Must be of type 'vector', not 'NULL'\n * checkmate::check_factor(data): Must be of type 'factor', not 'NULL'"),
fixed = TRUE)
expect_equal(
xpectr::strip(side_effects_15190[['error_class']]),
xpectr::strip(c("simpleError", "error", "condition")),
fixed = TRUE)
# Testing rev_windows(data = dplyr::group_by(df, G), w...
# Changed from baseline: data, window_size
xpectr::set_test_seed(42)
# Assigning output
output_17365 <- rev_windows(data = dplyr::group_by(df, G), window_size = 4, factor_name = NULL, overwrite = TRUE)
# Testing class
expect_equal(
class(output_17365),
c("tbl_df", "tbl", "data.frame"),
fixed = TRUE)
# Testing column values
expect_equal(
output_17365[["index"]],
c(4, 3, 2, 1, 6, 5, 10, 9, 8, 7, 12, 11),
tolerance = 1e-4)
expect_equal(
output_17365[["A"]],
c(8, 3, 12, 11, 4, 6, 7, 10, 1, 5, 2, 9),
tolerance = 1e-4)
expect_equal(
output_17365[["G"]],
c(1, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2, 2),
tolerance = 1e-4)
expect_equal(
output_17365[["G_index"]],
c(4, 3, 2, 1, 6, 5, 4, 3, 2, 1, 6, 5),
tolerance = 1e-4)
# Testing column names
expect_equal(
names(output_17365),
c("index", "A", "G", "G_index"),
fixed = TRUE)
# Testing column classes
expect_equal(
xpectr::element_classes(output_17365),
c("integer", "integer", "numeric", "integer"),
fixed = TRUE)
# Testing column types
expect_equal(
xpectr::element_types(output_17365),
c("integer", "integer", "double", "integer"),
fixed = TRUE)
# Testing dimensions
expect_equal(
dim(output_17365),
c(12L, 4L))
# Testing group keys
expect_equal(
colnames(dplyr::group_keys(output_17365)),
character(0),
fixed = TRUE)
# Testing rev_windows(data = df, window_size = 2, fact...
# Changed from baseline: window_size = 2
xpectr::set_test_seed(42)
# Assigning output
output_11346 <- rev_windows(data = df, window_size = 2, factor_name = NULL, overwrite = TRUE)
# Testing class
expect_equal(
class(output_11346),
c("tbl_df", "tbl", "data.frame"),
fixed = TRUE)
# Testing column values
expect_equal(
output_11346[["index"]],
c(2, 1, 4, 3, 6, 5, 8, 7, 10, 9, 12, 11),
tolerance = 1e-4)
expect_equal(
output_11346[["A"]],
c(12, 11, 8, 3, 4, 6, 1, 5, 7, 10, 2, 9),
tolerance = 1e-4)
expect_equal(
output_11346[["G"]],
c(1, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2, 2),
tolerance = 1e-4)
expect_equal(
output_11346[["G_index"]],
c(2, 1, 4, 3, 6, 5, 2, 1, 4, 3, 6, 5),
tolerance = 1e-4)
# Testing column names
expect_equal(
names(output_11346),
c("index", "A", "G", "G_index"),
fixed = TRUE)
# Testing column classes
expect_equal(
xpectr::element_classes(output_11346),
c("integer", "integer", "numeric", "integer"),
fixed = TRUE)
# Testing column types
expect_equal(
xpectr::element_types(output_11346),
c("integer", "integer", "double", "integer"),
fixed = TRUE)
# Testing dimensions
expect_equal(
dim(output_11346),
c(12L, 4L))
# Testing group keys
expect_equal(
colnames(dplyr::group_keys(output_11346)),
character(0),
fixed = TRUE)
# Testing rev_windows(data = df, window_size = 0, fact...
# Changed from baseline: window_size = 0
xpectr::set_test_seed(42)
# Testing side effects
# Assigning side effects
side_effects_16569 <- xpectr::capture_side_effects(rev_windows(data = df, window_size = 0, factor_name = NULL, overwrite = TRUE), reset_seed = TRUE)
expect_equal(
xpectr::strip(side_effects_16569[['error']]),
xpectr::strip("1 assertions failed:\n * Variable 'window_size': Must be >= 1."),
fixed = TRUE)
expect_equal(
xpectr::strip(side_effects_16569[['error_class']]),
xpectr::strip(c("simpleError", "error", "condition")),
fixed = TRUE)
# Testing rev_windows(data = df, window_size = 13, fac...
# Changed from baseline: window_size = 13
xpectr::set_test_seed(42)
# Assigning output
output_17050 <- rev_windows(data = df, window_size = 13, factor_name = NULL, overwrite = TRUE)
# Testing class
expect_equal(
class(output_17050),
c("tbl_df", "tbl", "data.frame"),
fixed = TRUE)
# Testing column values
expect_equal(
output_17050[["index"]],
c(12, 11, 10, 9, 8, 7, 6, 5, 4, 3, 2, 1),
tolerance = 1e-4)
expect_equal(
output_17050[["A"]],
c(2, 9, 7, 10, 1, 5, 4, 6, 8, 3, 12, 11),
tolerance = 1e-4)
expect_equal(
output_17050[["G"]],
c(2, 2, 2, 2, 2, 2, 1, 1, 1, 1, 1, 1),
tolerance = 1e-4)
expect_equal(
output_17050[["G_index"]],
c(6, 5, 4, 3, 2, 1, 6, 5, 4, 3, 2, 1),
tolerance = 1e-4)
# Testing column names
expect_equal(
names(output_17050),
c("index", "A", "G", "G_index"),
fixed = TRUE)
# Testing column classes
expect_equal(
xpectr::element_classes(output_17050),
c("integer", "integer", "numeric", "integer"),
fixed = TRUE)
# Testing column types
expect_equal(
xpectr::element_types(output_17050),
c("integer", "integer", "double", "integer"),
fixed = TRUE)
# Testing dimensions
expect_equal(
dim(output_17050),
c(12L, 4L))
# Testing group keys
expect_equal(
colnames(dplyr::group_keys(output_17050)),
character(0),
fixed = TRUE)
# Testing rev_windows(data = df, window_size = NA, fac...
# Changed from baseline: window_size = NA
xpectr::set_test_seed(42)
# Testing side effects
# Assigning side effects
side_effects_14577 <- xpectr::capture_side_effects(rev_windows(data = df, window_size = NA, factor_name = NULL, overwrite = TRUE), reset_seed = TRUE)
expect_equal(
xpectr::strip(side_effects_14577[['error']]),
xpectr::strip("1 assertions failed:\n * Variable 'window_size': May not be NA."),
fixed = TRUE)
expect_equal(
xpectr::strip(side_effects_14577[['error_class']]),
xpectr::strip(c("simpleError", "error", "condition")),
fixed = TRUE)
# Testing rev_windows(data = df, window_size = NULL, f...
# Changed from baseline: window_size = NULL
xpectr::set_test_seed(42)
# Testing side effects
# Assigning side effects
side_effects_17191 <- xpectr::capture_side_effects(rev_windows(data = df, window_size = NULL, factor_name = NULL, overwrite = TRUE), reset_seed = TRUE)
expect_equal(
xpectr::strip(side_effects_17191[['error']]),
xpectr::strip("1 assertions failed:\n * Variable 'window_size': Must be of type 'count', not 'NULL'."),
fixed = TRUE)
expect_equal(
xpectr::strip(side_effects_17191[['error_class']]),
xpectr::strip(c("simpleError", "error", "condition")),
fixed = TRUE)
# Testing rev_windows(data = df, window_size = 3, fact...
# Changed from baseline: factor_name = NA
xpectr::set_test_seed(42)
# Testing side effects
# Assigning side effects
side_effects_19346 <- xpectr::capture_side_effects(rev_windows(data = df, window_size = 3, factor_name = NA, overwrite = TRUE), reset_seed = TRUE)
expect_equal(
xpectr::strip(side_effects_19346[['error']]),
xpectr::strip("1 assertions failed:\n * Variable 'factor_name': May not be NA."),
fixed = TRUE)
expect_equal(
xpectr::strip(side_effects_19346[['error_class']]),
xpectr::strip(c("simpleError", "error", "condition")),
fixed = TRUE)
# Testing rev_windows(data = df, window_size = 3, fact...
# Changed from baseline: factor_name = 1
xpectr::set_test_seed(42)
# Testing side effects
# Assigning side effects
side_effects_12554 <- xpectr::capture_side_effects(rev_windows(data = df, window_size = 3, factor_name = 1, overwrite = TRUE), reset_seed = TRUE)
expect_equal(
xpectr::strip(side_effects_12554[['error']]),
xpectr::strip("1 assertions failed:\n * Variable 'factor_name': Must be of type 'string' (or 'NULL'), not 'double'."),
fixed = TRUE)
expect_equal(
xpectr::strip(side_effects_12554[['error_class']]),
xpectr::strip(c("simpleError", "error", "condition")),
fixed = TRUE)
# Testing rev_windows(data = df, window_size = 3, fact...
# Changed from baseline: factor_name = ".window"
xpectr::set_test_seed(42)
# Assigning output
output_14622 <- rev_windows(data = df, window_size = 3, factor_name = ".window", overwrite = TRUE)
# Testing class
expect_equal(
class(output_14622),
c("tbl_df", "tbl", "data.frame"),
fixed = TRUE)
# Testing column values
expect_equal(
output_14622[["index"]],
c(3, 2, 1, 6, 5, 4, 9, 8, 7, 12, 11, 10),
tolerance = 1e-4)
expect_equal(
output_14622[["A"]],
c(3, 12, 11, 4, 6, 8, 10, 1, 5, 2, 9, 7),
tolerance = 1e-4)
expect_equal(
output_14622[["G"]],
c(1, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2, 2),
tolerance = 1e-4)
expect_equal(
output_14622[["G_index"]],
c(3, 2, 1, 6, 5, 4, 3, 2, 1, 6, 5, 4),
tolerance = 1e-4)
expect_equal(
output_14622[[".window"]],
c(1, 1, 1, 2, 2, 2, 3, 3, 3, 4, 4, 4),
tolerance = 1e-4)
# Testing column names
expect_equal(
names(output_14622),
c("index", "A", "G", "G_index", ".window"),
fixed = TRUE)
# Testing column classes
expect_equal(
xpectr::element_classes(output_14622),
c("integer", "integer", "numeric", "integer", "integer"),
fixed = TRUE)
# Testing column types
expect_equal(
xpectr::element_types(output_14622),
c("integer", "integer", "double", "integer", "integer"),
fixed = TRUE)
# Testing dimensions
expect_equal(
dim(output_14622),
c(12L, 5L))
# Testing group keys
expect_equal(
colnames(dplyr::group_keys(output_14622)),
character(0),
fixed = TRUE)
# Testing rev_windows(data = df, window_size = 3, fact...
# Changed from baseline: factor_name, overwrite
xpectr::set_test_seed(42)
# Testing side effects
# Assigning side effects
side_effects_19400 <- xpectr::capture_side_effects(rev_windows(data = df, window_size = 3, factor_name = "A", overwrite = FALSE), reset_seed = TRUE)
expect_match(
xpectr::strip(side_effects_19400[['error']]),
xpectr::strip("1 assertions failed:\n * The column 'A' already exists and 'overwrite' is disabled."),
fixed = TRUE)
expect_equal(
xpectr::strip(side_effects_19400[['error_class']]),
xpectr::strip(c(purrr_error, "error", "condition")),
fixed = TRUE)
# Testing rev_windows(data = df, window_size = 3, fact...
# Changed from baseline: overwrite = NA
xpectr::set_test_seed(42)
# Testing side effects
# Assigning side effects
side_effects_19782 <- xpectr::capture_side_effects(rev_windows(data = df, window_size = 3, factor_name = NULL, overwrite = NA), reset_seed = TRUE)
expect_equal(
xpectr::strip(side_effects_19782[['error']]),
xpectr::strip("1 assertions failed:\n * Variable 'overwrite': May not be NA."),
fixed = TRUE)
expect_equal(
xpectr::strip(side_effects_19782[['error_class']]),
xpectr::strip(c("simpleError", "error", "condition")),
fixed = TRUE)
# Testing rev_windows(data = df, window_size = 3, fact...
# Changed from baseline: overwrite = NULL
xpectr::set_test_seed(42)
# Testing side effects
# Assigning side effects
side_effects_11174 <- xpectr::capture_side_effects(rev_windows(data = df, window_size = 3, factor_name = NULL, overwrite = NULL), reset_seed = TRUE)
expect_equal(
xpectr::strip(side_effects_11174[['error']]),
xpectr::strip("1 assertions failed:\n * Variable 'overwrite': Must be of type 'logical flag', not 'NULL'."),
fixed = TRUE)
expect_equal(
xpectr::strip(side_effects_11174[['error_class']]),
xpectr::strip(c("simpleError", "error", "condition")),
fixed = TRUE)
## Finished testing 'rev_windows' ####
#
})
test_that("testing rev_windows_vec()", {
xpectr::set_test_seed(42)
## Testing 'rev_windows_vec(data = sort(runif(10)), wind...' ####
## Initially generated by xpectr
xpectr::set_test_seed(42)
# Assigning output
output_19148 <- rev_windows_vec(data = sort(runif(10)), window_size = 3)
# Testing class
expect_equal(
class(output_19148),
"numeric",
fixed = TRUE)
# Testing type
expect_type(
output_19148,
type = "double")
# Testing values
expect_equal(
output_19148,
c(0.5191, 0.28614, 0.13467, 0.70506, 0.65699, 0.64175, 0.91481,
0.83045, 0.73659, 0.93708),
tolerance = 1e-4)
# Testing names
expect_equal(
names(output_19148),
NULL,
fixed = TRUE)
# Testing length
expect_equal(
length(output_19148),
10L)
# Testing sum of element lengths
expect_equal(
sum(xpectr::element_lengths(output_19148)),
10L)
## Finished testing 'rev_windows_vec(data = sort(runif(10)), wind...' ####
})
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