Man pages for respirometry
Tools for Conducting and Analyzing Respirometry Experiments
| adj_by_temp | Predict biological parameters at a new temperature |
| calc_alpha | Calculate the oxygen supply capacity (alpha) |
| calc_b | Calculate the metabolic scaling coefficient, b |
| calc_E | Calculate E temperature coefficient |
| calc_MO2 | Calculate metabolic rate |
| calc_pcrit | Calculate Pcrit |
| closed | Closed respirometry |
| co2_add | Calculate CO2 to add to water |
| co2_flush | Calculate CO2 to add to flush reservoir |
| co2_rate | Calculate CO2 to add to a respirometer intake flow |
| conv_nh4 | Convert between units of ammonia (NH3) / ammonium (NH4+) |
| conv_o2 | Convert between units of oxygen partial pressure and... |
| conv_resp_unit | Convert units related to respirometry |
| correct_bubble | Adjust respirometer volume for bubbles |
| flush_carb | Estimate carbonate chemistry after a flush |
| flush_o2 | Estimate dissolved O2 after a flush |
| flush_water | Find percent of water exchanged after a flush |
| goal_flush_pH | Calculate goal pH of a flush reservoir to achieve the... |
| guess_TA | Estimate total alkalinity from salinity |
| guess_when | Estimate when the O2 level will reach a defined level |
| import_firesting | Import data from a FireSting O2 transmitter |
| import_presens | Import data from a PreSens O2 transmitter |
| import_witrox | Import data from a Loligo Systems Witrox O2 transmitter |
| make_bins | Make time bins for MO2 calculations |
| max_MO2 | Maximum MO2 supported by flow rate |
| mean_pH | Mean pH by [H+] |
| min_flow | Minimum flow rate to support MO2 |
| peri_pump | Calculate peristaltic pump gaseous flow rate |
| plot_pcrit | Plot Pcrit |
| predict_nh3 | Predict NH3 / NH4+ concentration post-respiration |
| predict_pH | Predict pH post-respiration |
| Q10 | Parameters of Q10 Temperature Coefficient |
| respirometry | Tools for Conducting Respirometry Experiments |
| RQ | Calculate respiratory quotient |
| scale_MO2 | Mass-correct metabolic rate |
