Description Usage Arguments Value See Also Examples
Get Interaction Matrix. Constructs an interaction matrix indicating whether source taxa (rows) or target taxa (columns) are known to interact with given type.
1 2 3 | get_interaction_matrix(source.taxon.names = list("Homo sapiens"),
target.taxon.names = list("Mammalia"), interaction.type = "eats",
opts = list(), read_csv = read_csv_online)
|
source.taxon.names |
list of source taxon names (e.g. list('Mammalia', 'Aves', 'Ariopsis felis')) |
target.taxon.names |
list of target taxon names |
interaction.type |
the preferred interaction type (e.g. preysOn) |
opts |
list of options to configure GloBI API |
read_csv |
function used to find csv associated to query url, defaulting to online query method |
matrix representing species interactions between source and target taxa
Other interactions: get_child_taxa
,
get_interaction_table
,
get_interaction_types
,
get_interactions_by_taxa
,
get_interactions_by_type
,
get_interactions
,
get_predators_of
, get_prey_of
1 2 3 4 | ## Not run:
get_interaction_matrix("Homo sapiens", "Mammalia", "interactsWith")
## End(Not run)
|
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