extname: Get the base and extension(s) of file name(s)
In ribiosUtils: Utilities from and Interface to the Bioinfo-C (BIOS) Library

Description Usage Arguments Value Note Author(s) Examples

Many files have base and extensions in their names, for instance for the file mybook.pdf, the base is mybook and the extension is pdf. basefilename extname functions extract these information from one or more file names.

1	extname(x, ifnotfound = NA, lower.case = FALSE)

`x`	Character vector of file names; other classes will be coereced to characters
`ifnotfound`	If no extension name was found, the value to be returned. Default is `NA`
`lower.case`	Logical, should the names returned in lower case?

The base file name or the extension as characters, of the same length as the input file name character. In case that a file name does not contain a extension, NA will be returned.

In case there are multiple dots in the input file name, the last field will be taken as the extension, and the rest as the base name. For instance for file test.out.txt, returned base name is test.out and extension is txt.

Jitao David Zhang <jitao_david.zhang@roche.com>

extname("mybook.pdf")
extname("sequence.in.fasta")
extname(c("/path/mybook.pdf", "test.doc"))
extname("README")
extname("README", ifnotfound="")
extname("/path/my\ home/Holiday Plan.txt")

basefilename("mybook.pdf")
basefilename("sequence.in.fasta")
basefilename(c("/path/mybook.pdf", "test.doc"))
basefilename("README")
basefilename("/path/my\ home/Holiday Plan.txt")

basefilename("myBook.pdf", lower.case=TRUE)
extname("myBook.PDF", lower.case=TRUE)