ridigbio: Interface to the iDigBio Data API
Version 0.3.5

An interface to iDigBio's search API that allows downloading specimen records. Searches are returned as a data.frame. Other functions such as the metadata end points return lists of information. iDigBio is a US project focused on digitizing and serving museum specimen collections on the web. See for information on iDigBio.

AuthorFrancois Michonneau [aut, cph], Matthew Collins [aut, cre], Scott Chamberlain [ctb], Kevin Love [ctb], Hem Nalini Morzaria-Luna [ctb]
Date of publication2017-02-16 17:57:11
MaintainerMatthew Collins <mcollins@acis.ufl.edu>
LicenseMIT + file LICENSE
Version0.3.5
URL https://github.com/iDigBio/ridigbio
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("ridigbio")

Getting started

README.md

Popular man pages

idig_check: check HTTP code
idig_check_error: Check is the request returned an error.
idig_count_media: Count media endpoint
idig_count_records: Count record endpoint
idig_search_media: Searching of iDigBio media records
idig_url: base URL
ridigbio: Retrieve data from the iDigBio specimen data repository.
See all...

All man pages Function index File listing

Man pages

build_field_lists: Build fields and fields_exclude for queries.
idig_build_attrib: Attribution dataframe of iDigBio records query
idig_check: check HTTP code
idig_check_error: Check is the request returned an error.
idig_count_media: Count media endpoint
idig_count_records: Count record endpoint
idig_GET: internal GET request
idig_meta_fields: meta fields endpoint
idig_parse: parse successfully returned request
idig_POST: internal POST request
idig_search: Basic searching of iDigBio records
idig_search_media: Searching of iDigBio media records
idig_search_records: Searching of iDigBio records
idig_top_media: Top media endpoint
idig_top_records: Top records endpoint
idig_url: base URL
idig_validate: validate fields
idig_version: API version
idig_view_media: view media endpoint
idig_view_records: view specimen endpoint
ridigbio: Retrieve data from the iDigBio specimen data repository.

Functions

build_field_lists Man page Source code
fmt_countmedia_txt_to_num Source code
fmt_countrecords_txt_to_num Source code
fmt_metafields_txt_to_indexed Source code
fmt_metafields_txt_to_list Source code
fmt_metafields_txt_to_raw Source code
fmt_search_txt_to_attribution Source code
fmt_search_txt_to_df Source code
fmt_search_txt_to_itemCount Source code
fmt_topmedia_txt_to_list Source code
fmt_toprecords_txt_to_list Source code
fmt_view_txt_to_list Source code Source code
idig_GET Man page Source code
idig_POST Man page Source code
idig_build_attrib Man page Source code
idig_check Man page Source code
idig_check_error Man page Source code
idig_count_media Man page Source code
idig_count_records Man page Source code
idig_meta_fields Man page Source code
idig_parse Man page Source code
idig_search Man page Source code
idig_search_media Man page Source code
idig_search_records Man page Source code
idig_top_media Man page Source code
idig_top_records Man page Source code
idig_url Man page Source code
idig_validate Man page Source code
idig_version Man page Source code
idig_view_media Man page Source code
idig_view_records Man page Source code
onAttach Source code
ridigbio Man page
ridigbio-package Man page

Files

tests
tests/testthat.R
tests/testthat
tests/testthat/test-idig_top_records.R
tests/testthat/test-idig_meta_fields.R
tests/testthat/test-idig_view_media.R
tests/testthat/test-idig_view_records.R
tests/testthat/test-idig_build_attrib.R
tests/testthat/test-idig_search_records.R
tests/testthat/test-idig_search_media.R
tests/testthat/test-idig_top_media.R
tests/testthat/test-base.R
tests/testthat/test-idig_count_records.R
tests/testthat/test-idig_count_media.R
NAMESPACE
R
R/idig_search_media.R
R/idig_count_records.R
R/idig_count_media.R
R/ridigbio.R
R/idig_search.R
R/idig_top_media.R
R/idig_top_records.R
R/idig_build_attrib.R
R/idig_view_records.R
R/idig_search_records.R
R/startup.R
R/idig_meta_fields.R
R/base.R
R/idig_view_media.R
README.md
MD5
DESCRIPTION
man
man/idig_count_media.Rd
man/ridigbio.Rd
man/idig_version.Rd
man/idig_top_media.Rd
man/idig_parse.Rd
man/idig_view_media.Rd
man/idig_search_records.Rd
man/idig_build_attrib.Rd
man/idig_POST.Rd
man/idig_count_records.Rd
man/idig_check_error.Rd
man/idig_validate.Rd
man/idig_GET.Rd
man/build_field_lists.Rd
man/idig_search_media.Rd
man/idig_top_records.Rd
man/idig_view_records.Rd
man/idig_meta_fields.Rd
man/idig_url.Rd
man/idig_check.Rd
man/idig_search.Rd
LICENSE
ridigbio documentation built on May 20, 2017, 12:48 a.m.

Questions? Problems? Suggestions? Tweet to @rdrrHQ or email at ian@mutexlabs.com.

Please suggest features or report bugs in the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.