ridigbio: Interface to the iDigBio Data API

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An interface to iDigBio's search API that allows downloading specimen records. Searches are returned as a data.frame. Other functions such as the metadata end points return lists of information. iDigBio is a US project focused on digitizing and serving museum specimen collections on the web. See <https://www.idigbio.org> for information on iDigBio.

Author
Francois Michonneau [aut, cph], Matthew Collins [aut, cre], Scott Chamberlain [ctb], Kevin Love [ctb], Hem Nalini Morzaria-Luna [ctb]
Date of publication
2016-10-27 00:21:15
Maintainer
Matthew Collins <mcollins@acis.ufl.edu>
License
MIT + file LICENSE
Version
0.3.4
URLs

View on CRAN

Man pages

build_field_lists
Build fields and fields_exclude for queries.
idig_build_attrib
Attribution dataframe of iDigBio records query
idig_check
check HTTP code
idig_check_error
Check is the request returned an error.
idig_count_media
Count media endpoint
idig_count_records
Count record endpoint
idig_GET
internal GET request
idig_meta_fields
meta fields endpoint
idig_parse
parse successfully returned request
idig_POST
internal POST request
idig_search
Basic searching of iDigBio records
idig_search_media
Searching of iDigBio media records
idig_search_records
Searching of iDigBio records
idig_top_media
Top media endpoint
idig_top_records
Top records endpoint
idig_url
base URL
idig_validate
validate fields
idig_version
API version
idig_view_media
view media endpoint
idig_view_records
view specimen endpoint
ridigbio
Retrieve data from the iDigBio specimen data repository.

Files in this package

ridigbio
ridigbio/tests
ridigbio/tests/testthat.R
ridigbio/tests/testthat
ridigbio/tests/testthat/test-idig_top_records.R
ridigbio/tests/testthat/test-idig_meta_fields.R
ridigbio/tests/testthat/test-idig_view_media.R
ridigbio/tests/testthat/test-idig_view_records.R
ridigbio/tests/testthat/test-idig_build_attrib.R
ridigbio/tests/testthat/test-idig_search_records.R
ridigbio/tests/testthat/test-idig_search_media.R
ridigbio/tests/testthat/test-idig_top_media.R
ridigbio/tests/testthat/test-base.R
ridigbio/tests/testthat/test-idig_count_records.R
ridigbio/tests/testthat/test-idig_count_media.R
ridigbio/NAMESPACE
ridigbio/R
ridigbio/R/idig_search_media.R
ridigbio/R/idig_count_records.R
ridigbio/R/idig_count_media.R
ridigbio/R/ridigbio.R
ridigbio/R/idig_search.R
ridigbio/R/idig_top_media.R
ridigbio/R/idig_top_records.R
ridigbio/R/idig_build_attrib.R
ridigbio/R/idig_view_records.R
ridigbio/R/idig_search_records.R
ridigbio/R/startup.R
ridigbio/R/idig_meta_fields.R
ridigbio/R/base.R
ridigbio/R/idig_view_media.R
ridigbio/README.md
ridigbio/MD5
ridigbio/DESCRIPTION
ridigbio/man
ridigbio/man/idig_count_media.Rd
ridigbio/man/ridigbio.Rd
ridigbio/man/idig_version.Rd
ridigbio/man/idig_top_media.Rd
ridigbio/man/idig_parse.Rd
ridigbio/man/idig_view_media.Rd
ridigbio/man/idig_search_records.Rd
ridigbio/man/idig_build_attrib.Rd
ridigbio/man/idig_POST.Rd
ridigbio/man/idig_count_records.Rd
ridigbio/man/idig_check_error.Rd
ridigbio/man/idig_validate.Rd
ridigbio/man/idig_GET.Rd
ridigbio/man/build_field_lists.Rd
ridigbio/man/idig_search_media.Rd
ridigbio/man/idig_top_records.Rd
ridigbio/man/idig_view_records.Rd
ridigbio/man/idig_meta_fields.Rd
ridigbio/man/idig_url.Rd
ridigbio/man/idig_check.Rd
ridigbio/man/idig_search.Rd
ridigbio/LICENSE