convertOldLiger: Convert older liger object into most current version (based...

In rliger: Linked Inference of Genomic Experimental Relationships

Convert older liger object into most current version (based on class definition)

Description

Also works for Analogizer objects (but must have both liger and Analogizer loaded). Transfers data in slots with same names from old class object to new, leaving slots defined only in new class NULL.

Usage

convertOldLiger(object, override.raw = FALSE, verbose = TRUE)

Arguments

object	liger object.
override.raw	Keep original raw.data without any modifications (removing missing cells etc.) (defualt FALSE).
verbose	Print progress bar/messages (TRUE by default)

Value

Updated liger object.

Examples

## Not run: 
# Not able to generate old object from current version, thus not run
ligerex <- convertOldLiger(analogy)

## End(Not run)

rliger documentation built on Nov. 9, 2023, 1:07 a.m.