rliger-package: rliger: Linked Inference of Genomic Experimental...

In rliger: Linked Inference of Genomic Experimental Relationships

rliger: Linked Inference of Genomic Experimental Relationships

Description

Uses an extension of nonnegative matrix factorization to identify shared and dataset-specific factors. See Welch J, Kozareva V, et al (2019) \Sexpr[results=rd]{tools:::Rd_expr_doi("10.1016/j.cell.2019.05.006")}, and Liu J, Gao C, Sodicoff J, et al (2020) \Sexpr[results=rd]{tools:::Rd_expr_doi("10.1038/s41596-020-0391-8")} for more details.

Author(s)

Maintainer: Yichen Wang [e-mail]

Authors:

• Joshua Welch [e-mail]

• Chao Gao [e-mail]

• Jialin Liu [e-mail]

• Joshua Sodicoff [e-mail] [contributor]

• Velina Kozareva [contributor]

• Evan Macosko [contributor]

Other contributors:

• Paul Hoffman [contributor]

• Ilya Korsunsky [contributor]

• Robert Lee [contributor]

• Andrew Robbins [e-mail] [contributor]

See Also

Useful links:

• https://welch-lab.github.io/liger/

• Report bugs at https://github.com/welch-lab/liger/issues

rliger documentation built on Oct. 30, 2024, 1:07 a.m.