API for rnaseqWrapper
Wrapper for several R packages and scripts to automate RNA-seq analysis
| Global functions | |
|---|---|
| DESeqWrapper | Man page |
| calcBasicDE | Man page |
| calcCombVals | Man page |
| calcHornMatrix | Man page |
| calcLogVal | Man page |
| calculateThirdPosBias | Man page |
| determineSynonymous | Man page |
| fastaExample | Man page |
| female_1.genes.results | Man page |
| female_2.genes.results | Man page |
| female_3.genes.results | Man page |
| heatmap.mark | Man page |
| kaksFromVariants | Man page |
| male_1.genes.results | Man page |
| male_2.genes.results | Man page |
| male_3.genes.results | Man page |
| mergeCountFiles | Man page |
| nSynNonSites | Man page |
| parseVarScan | Man page |
| plotDE | Man page |
| plotDispEsts | Man page |
| readVariantFiles | Man page |
| rnaseqWrapper | Man page |
| rnaseqWrapper-package | Man page |
| runGOAnalysis | Man page |
| varScanExample | Man page |
