robustlmm: Robust Linear Mixed Effects Models
Version 2.1-3

A method to fit linear mixed effects models robustly. Robustness is achieved by modification of the scoring equations combined with the Design Adaptive Scale approach.

AuthorManuel Koller
Date of publication2017-04-09 14:14:29 UTC
MaintainerManuel Koller <koller.manuel@gmail.com>
LicenseGPL-2
Version2.1-3
URL https://github.com/kollerma/robustlmm
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("robustlmm")

Getting started

Package overview
README.md

Popular man pages

chgDefaults: Change default arguments
other: Other methods
plot-methods: Plot an Object of the "Psi Function" Class
plot.rlmerMod: Plot Method for "rlmerMod" objects.
psi-functions: Classical, Huber and smoothed Huber psi- or rho-functions
rlmer: Robust linear mixed models
rlmerMod-class: rlmerMod Class
See all...

All man pages Function index File listing

Man pages

chgDefaults: Change default arguments
compare: Create comparison charts for multiple fits
getME: Extract or Get Generalize Components from a Fitted Mixed...
other: Other methods
plot-methods: Plot an Object of the "Psi Function" Class
plot.rlmerMod: Plot Method for "rlmerMod" objects.
psi2propII: Convert to Propsal II weight function
psi-functions: Classical, Huber and smoothed Huber psi- or rho-functions
residuals.rlmerMod: Get residuals
rlmer: Robust linear mixed models
rlmerMod-class: rlmerMod Class
robustlmm-package: Robust linear mixed effects models

Functions

Dd2 Source code
G Source code
Lambda Source code
Lind Source code
S Source code
U_b Source code
VarCorr.rlmerMod Man page Source code
VarCorr.summary.rlmerMod Man page Source code
b Source code Source code
b.lmerMod Source code
b.rlmerMod Source code
cPsi Man page
calcE.D.re Source code
calcE.D.re2 Source code
calcE.psi_bbt Source code
calcE.psi_bpsi_bt Source code
calcKappaTau Source code
calcKappaTauB Source code
calcTau Source code
calcTau.nondiag Source code
chgDefaults Man page Source code
chgDefaults,Rcpp_HuberPsi-method Man page
chgDefaults,Rcpp_PsiFunction-method Man page
chgDefaults,Rcpp_PsiFunctionToPropIIPsiFunctionWrapper-method Man page
chgDefaults,Rcpp_SmoothPsi-method Man page
coef.rlmerMod Man page Source code
compare Man page Source code
convLme4Rlmer Source code
d Source code
d2 Source code
deviance Source code
deviance.rlmerMod Man page
dist.b Source code
dist.e Source code
dk Source code
dotplot.coef.rlmerMod Source code
extractAIC.rlmerMod Man page Source code
family.rlmerMod Man page Source code
findBlocks Source code
fitEffects Source code
fitted.rlmerMod Man page
fixef Source code
fixef.rlmerMod Man page Source code
formatVC Source code
formula.rlmerMod Man page
getFixedFormula Source code
getInfo Man page Source code
getInfo.lmerMod Man page Source code
getInfo.rlmerMod Man page Source code
getME Man page
getME.rlmerMod Man page Source code
getX Source code
getZ Source code
getZeroU Source code
ghq Source code
huberPsiRcpp Man page
isGLMM.rlmerMod Man page Source code
isLMM.rlmerMod Man page Source code
isNLMM.rlmerMod Man page Source code
isREML.rlmerMod Man page Source code
lchol Source code
len Source code
lmerNoFit Man page Source code
logLik.rlmerMod Man page Source code
lower Source code
matplotPsi Source code
methTitle Source code
model.frame.rlmerMod Man page
model.matrix.rlmerMod Man page Source code
mu Source code
nobs.rlmerMod Man page
nobsLmerMod Source code
plot,Rcpp_HuberPsi-method Man page
plot,Rcpp_PsiFunction-method Man page
plot,Rcpp_PsiFunctionToPropIIPsiFunctionWrapper-method Man page
plot,Rcpp_SmoothPsi-method Man page
plot-methods Man page
plot.coef.rlmerMod Source code
plot.rlmerMod Man page Source code
plotPsi Source code
predict.rlmerMod Man page Source code Source code
print.VarCorr.rlmerMod Man page
print.comparison.table Source code
print.rlmerMod Man page Source code
print.rlmerMod_plots Man page Source code
print.summary.rlmer Man page
print.summary.rlmerMod Source code
print.xtable.comparison.table Man page Source code
prt.VC Source code
prt.call Source code
prt.grps Source code
prt.resids Source code
psi-functions Man page
psi2propII Man page Source code
psi2propII,Rcpp_HuberPsi-method Man page
psi2propII,Rcpp_PsiFunction-method Man page
psi2propII,Rcpp_PsiFunctionToPropIIPsiFunctionWrapper-method Man page
psi2propII,Rcpp_SmoothPsi-method Man page
qq Source code
ranef.rlmerMod Man page Source code
reFormHack Source code
resid.rlmerMod Man page
residuals.rlmerMod Man page Source code
rho.b Source code
rho.e Source code
rlmer Man page Source code
rlmer.fit.DAS Source code
rlmer.fit.DAS.nondiag Source code
rlmerMod-class Man page
robustlmm Man page
robustlmm-package Man page
rsc Source code
s Source code
sREML Source code
setB Source code
setFixef Source code
setSigma Source code
setTheta Source code
setU Source code
show Man page Source code
show,Rcpp_HuberPsi-method Man page
show,Rcpp_PsiFunction-method Man page
show,Rcpp_PsiFunctionToPropIIPsiFunctionWrapper-method Man page
show,Rcpp_SmoothPsi-method Man page
show,rlmerMod-method Man page
show.rlmerMod Man page
show.summary.rlmerMod Man page
sigma Source code
sigma.rlmerMod Man page
smoothPsi Man page
sprintPsiFunc Source code
std.b Source code
std.e Source code
sumKappa Source code
summary.rlmerMod Man page Source code
summary.summary.rlmerMod Man page
ta Source code
terms.rlmerMod Man page
theta Man page Source code
tnames Source code
u Source code Source code
u.lmerMod Source code
u.rlmerMod Source code
uArranged Source code
uArrangedNames Source code
update.rlmerMod Man page Source code
updatePp Source code
updateSigma Source code
updateThetaTau Source code
updateWeights Source code
vcov.rlmerMod Man page
vcov.summary.rlmerMod Man page Source code
weights.rlmerMod Man page Source code
wgt.b Source code
wgt.e Source code
wgtxy Source code
wgtxy2 Source code
xtable.comparison.table Man page Source code

Files

inst
inst/CITATION
inst/doc
inst/doc/sleepstudy.R
inst/doc/rlmer.Rnw
inst/doc/plots.R
inst/doc/Penicillin.R
inst/doc/rlmer.R
inst/doc/ggplot.theme.R
inst/doc/rlmer.pdf
inst/include
inst/include/robustlmm.h
tests
tests/getME.R
tests/subset.R
tests/testMatrices.R
tests/PsiFunction.R
tests/genericFunctions.R
tests/DAS-scale.R
tests/rlmerMod.R
tests/getME.Rout.save
tests/compare-methods.Rout.save
tests/psi-rho-funs.R
tests/compare-methods.R
tests/expectations.R
tests/tau.R
src
src/PsiFunction.cpp
src/PsiFunction.h
src/robustlmm_init.cpp
src/Integration.cpp
src/misc.h
src/Integration.h
src/globals.h
NAMESPACE
R
R/helpers.R
R/accessors.R
R/plot.R
R/fromLme4.R
R/psiFunc2.R
R/AllClass.R
R/DAS-scale.R
R/mutators.R
R/fit.effects.R
R/ghq.R
R/rlmer.R
R/AllGeneric.R
R/lmer.R
vignettes
vignettes/Figures
vignettes/Figures/fig-ex-penicillin-contaminated.pdf
vignettes/Figures/fig-convergence.pdf
vignettes/efficiency-table-lqq-locationScale.tex
vignettes/efficiency-table-B-optimal.tex
vignettes/jsslogo.pdf
vignettes/efficiency-table-lqq.tex
vignettes/rlmer.Rnw
vignettes/rlmer.bib
vignettes/jss.dtx
vignettes/tuning-constants-table.tex
vignettes/rlmer.sty
README.md
MD5
build
build/vignette.rds
DESCRIPTION
man
man/getME.Rd
man/other.Rd
man/plot-methods.Rd
man/psi2propII.Rd
man/chgDefaults.Rd
man/rlmer.Rd
man/robustlmm-package.Rd
man/residuals.rlmerMod.Rd
man/plot.rlmerMod.Rd
man/compare.Rd
man/psi-functions.Rd
man/rlmerMod-class.Rd
robustlmm documentation built on May 19, 2017, 11:30 p.m.

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