shiny_organize_test: Shiny Organize Test

In romic: R for High-Dimensional Omic Data

Shiny Organize Test

Description

Tests the shiny organization module as stand-alone application.

Usage

shiny_organize_test(tidy_omic, feature_vars, sample_vars, value_var)

Arguments

tidy_omic	an object of class tidy_omic produced by create_tidy_omic
feature_vars	variables available for arranging features
sample_vars	variables available for arrange samples
value_var	An abundance value to use with hclust

Value

a shiny app

Examples

if (interactive()) {
  shiny_organize_test(
    brauer_2008_tidy,
    feature_vars = c("BP", "MF"),
    sample_vars = c("sample", "nutrient", "DR"),
    value_var = "expression"
  )
}

romic documentation built on Sept. 21, 2023, 9:06 a.m.