tests/testthat/test-identifiers.R

test_that("identifiers basic functionality works", {
  skip_on_cran()

  vcr::use_cassette("identifiers", {
    x <- works(orcid_id("0000-0001-8607-8025"))
    # doi by default
    aa <- identifiers(x)
    # orcids
    bb <- identifiers(x, "orcid")
    # pmid
    cc <- identifiers(x, "pmid")
    # pmc
    dd <- identifiers(x, "pmc")
    # other_id
    ee <- identifiers(x, "other_id")
  })

  expect_is(aa, "character")
  expect_is(bb, "character")
  expect_is(cc, "character")
  expect_is(dd, "character")
  expect_is(ee, "character")
  
  expect_equal(length(aa), length(check_dois(aa)$good))
  expect_true(all(grepl("PMC", dd)))
})

test_that("identifiers works with output from or_cid() call", {
  skip_on_cran()

  vcr::use_cassette("identifiers_output_from_or_cid", {
    x <- orcid_id(orcid = "0000-0002-9341-7985")
    aa <- identifiers(x, "doi")
    bb <- identifiers(x, "eid")
  })

  expect_is(aa, "character")
  expect_is(aa[1], "character")
  expect_identical(identifiers(x, "doi"), identifiers(x))
  expect_is(bb, "character")
})

test_that("identifiers works with output from orcid() call", {
  skip_on_cran()
  
  vcr::use_cassette("identifiers_output_from_orcid", {
    x <- orcid(query = "carl+boettiger")
    aa <- identifiers(x)
  })
  
  expect_is(aa, "character")
  expect_is(aa[1], "character")
  expect_identical(identifiers(x, "doi"), identifiers(x))
})

test_that("identifiers works with output from orcid_doi() call", {
  skip_on_cran()
  
  vcr::use_cassette("identifiers_output_from_orcid_doi", {
    x <- orcid_doi(dois = "10.1087/20120404", fuzzy = TRUE)
    aa <- identifiers(x)
  })
  
  expect_is(aa, "character")
  expect_is(aa[1], "character")
  expect_identical(identifiers(x), identifiers(x))
})

test_that("identifiers fails well on disallowed inputs", {
  skip_on_cran()
  
  expect_error(identifiers("adfadf"), "no 'identifiers' method for character")
  expect_error(identifiers(mtcars), "no 'identifiers' method for data.frame")
  expect_error(identifiers(matrix()), "no 'identifiers' method for matrix")
})

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rorcid documentation built on Jan. 21, 2021, 1:06 a.m.