get_study | Get all the trees associated with a particular study |
get_study_meta | Study Metadata |
get_study_subtree | Study Subtree |
get_study_tree | Study Tree |
is_in_tree | Check that OTT ids occur in the Synthetic Tree |
list_trees | List trees ids in objects returned by 'studies_find_studies'... |
match_names | Inspect and Update alternative matches for a name returned by... |
match_names-methods | 'ott_id' and 'flags' for taxonomic names matched by... |
rotl | An Interface to the Open Tree of Life API |
source_list | List of studies used in the Tree of Life |
strip_ott_ids | Strip OTT ids from tip labels |
studies_find_studies | Find a Study |
studies_find_trees | Find Trees |
studies_properties | Properties of the Studies |
study_external_IDs | Get external identifiers for data associated with an Open... |
synonyms.match_names | List the synonyms for a given name |
tax_lineage | Lineage of a taxon |
taxon_external_IDs | Get external identifiers for data associated with an Open... |
taxonomy_about | Information about the Open Tree Taxonomy |
taxonomy-methods | Methods for Taxonomy |
taxonomy_mrca | Taxonomic MRCA |
taxonomy_subtree | Taxonomy subtree |
taxonomy_taxon_info | Taxon information |
tnrs_contexts | TNRS contexts |
tnrs_infer_context | Infer the taxonomic context from a list of names |
tnrs_match_names | Match names to the Open Tree Taxonomy |
tol_about | Information about the Tree of Life |
tol_induced_subtree | Subtree from the Open Tree of Life |
tol_mrca | MRCA of taxa from the synthetic tree |
tol_node_info | Node info |
tol_subtree | Extract a subtree from the synthetic tree |
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