API for rubias
Bayesian Inference from the Conditional Genetic Stock Identification Model
| Global functions | |
|---|---|
| %>% | Man page |
| Hasselman_sim_colls | Man page Source code |
| a_freq_list | Man page Source code |
| alewife | Man page |
| allelic_list | Man page Source code |
| assess_pb_bias_correction | Man page Source code |
| assess_reference_loo | Man page Source code |
| assess_reference_mc | Man page Source code |
| avg_coll2correctRU | Man page Source code |
| blueback | Man page |
| bootstrap_rho | Man page Source code |
| check_known_collections | Man page Source code |
| check_refmix | Man page Source code |
| chinook | Man page |
| chinook_collection_levels | Man page |
| chinook_mix | Man page |
| chinook_repunit_levels | Man page |
| close_matching_samples | Man page Source code |
| count_missing_data | Man page Source code |
| custom_pi_prior | Man page Source code |
| dirch_from_allocations | Man page Source code |
| dirch_from_counts | Man page Source code |
| geno_logL | Man page Source code |
| geno_logL_ssq | Man page Source code |
| get_ploidy_from_frame | Man page Source code |
| gprob_sim_gc | Man page Source code |
| gprob_sim_gc_missing | Man page Source code |
| gprob_sim_ind | Man page Source code |
| gsi_em_1 | Man page Source code |
| gsi_mcmc_1 | Man page Source code |
| gsi_mcmc_fb | Man page Source code |
| infer_mixture | Man page Source code |
| list_diploid_params | Man page Source code |
| mixture_draw | Man page Source code |
| modify_scaled_likelihoods_for_known_mixture_fish | Man page Source code |
| per_locus_means_and_vars | Man page Source code |
| perfect_chinook | Man page |
| perfect_chinook_mix | Man page |
| rcpp_close_matchers | Man page Source code |
| rcpp_indiv_specific_logl_means_and_vars | Man page Source code |
| rcpp_per_locus_logls | Man page Source code |
| read_gsi_sim | Man page Source code |
| ref_and_mix_pipeline | Man page Source code |
| reference_allele_counts | Man page Source code |
| round2 | Man page |
| rubias | Man page |
| samp_from_mat | Man page Source code |
| self_assign | Man page Source code |
| sim_spec_examples | Man page |
| simulate_random_samples | Man page Source code |
| small_chinook_mix | Man page |
| small_chinook_ref | Man page |
| tcf2long | Man page Source code |
| tcf2param_list | Man page Source code |
| tidy_mcmc_coll_rep_stuff | Man page Source code |
| tidy_mcmc_pofz | Man page Source code |
| tidy_pi_traces | Man page Source code |
| write_gsi_sim_mixture | Man page Source code |
| write_gsi_sim_reference | Man page Source code |
