Man pages for rumenGP
Rumen Gas Production Modeling, Comparison, and Visualization
| as_rumen_gp | Convert data to a rumen_gp object |
| best_model_by_treatment | Identify the Best Model for Each Treatment |
| compare_models | Compare Fitted Kinetic Models |
| compare_models_by_treatment | Compare Models by Treatment |
| example_data | Example ANKOM Data |
| exclude_heads | Exclude Problematic ANKOM Heads |
| fit_brody | Fit Brody model |
| fit_custom | Fit Custom Nonlinear Model |
| fit_dual_logistic | Fit dual-pool logistic model |
| fit_exp0 | Fit exponential model without lag (EXP0) |
| fit_expl | Fit exponential model with lag (EXPL) |
| fit_gompertz | Fit Gompertz model |
| fit_groot | Fit Groot model |
| fit_le0 | Fit Logistic-Exponential model (LE0) |
| fit_lel | Fit Logistic-Exponential model (LEL) |
| fit_logistic | Fit Logistic model |
| fit_mitscherlich | Fit Mitscherlich model |
| fit_mm | Fit Michaelis-Menten model |
| fit_orskov | Fit Orskov and McDonald model |
| flag_model | Flag potentially problematic model fits |
| model_win_frequency | Model Win Frequency |
| parse_ankom_time | Parse ANKOM Timestamps |
| plot_all_fits | Plot All Fitted Curves |
| plot_all_treatment_means | Plot Treatment Means for All Treatments |
| plot_diagnostics | Plot Diagnostic Summaries |
| plot_dual_pools | Plot Dual-Pool Logistic Decomposition |
| plot_fit | Plot Fitted Model |
| plot_gp | Plot Raw Gas Production Curve |
| plot_model_comparison | Compare Model Fits |
| plot_model_comparison_all | Compare Models for All Bottles |
| plot_model_comparison_treatment | Compare Models for a Treatment |
| plot_model_performance | Plot Model Performance |
| plot_model_rankings | Plot Model Rankings |
| plot_residual_comparison | Compare Residuals Across Models |
| plot_residuals | Plot Model Residuals |
| plot_treatment_mean | Plot Treatment Means Across Models |
| pressure_to_volume | Convert Pressure to Gas Volume |
| process_ankom | Process ANKOM RF Data |
| rank_models | Rank Models |
| rank_models_by_treatment | Rank Models Within Each Treatment |
| read_ankom | Import ANKOM RF Output |
| read_metadata | Import Metadata |
| rumenGP-package | rumenGP |
| summary.brody_fit | Summary of Brody Fits |
| summary.custom_fit | Summary of Custom Model Fits |
| summary.dual_logistic_fit | Summary of Dual Logistic Fits |
| summary.exp0_fit | Summary of EXP0 Fits |
| summary.expl_fit | Summary of EXPL Fits |
| summary.gompertz_fit | Summary of Gompertz Fits |
| summary.groot_fit | Summary of Groot Fits |
| summary.le0_fit | Summary of LE0 Fits |
| summary.lel_fit | Summary of LEL Fits |
| summary.logistic_fit | Summary of Logistic Fits |
| summary.mitscherlich_fit | Summary of Mitscherlich Fits |
| summary.mm_fit | Summary of Michaelis-Menten Fits |
| summary.orskov_fit | Summary of Orskov and McDonald Fits |
| validate_ankom | Validate Processed Rumen Gas Production Data |
| validate_metadata | Validate Metadata |
