View source: R/read_metadata.R
| read_metadata | R Documentation |
Reads metadata associated with an ANKOM RF experiment.
read_metadata(file, sheet = "metadata")
file |
Path to a metadata file. |
sheet |
Sheet name containing metadata. |
Metadata are used to identify bottles, treatments, replicates, and other experimental information required for downstream analyses.
This function is typically used together with:
read_ankom()
process_ankom()
as part of the standard ANKOM workflow.
A data frame containing experimental metadata.
read_ankom,
process_ankom,
validate_metadata,
example_data
files <- example_data()
metadata <- read_metadata(
files$metadata
)
head(
metadata
)
# Typical workflow
raw_data <- read_ankom(
files$ankom
)
gp <- process_ankom(
raw_data,
metadata,
headspace_ml = 210,
temperature_c = 39
)
head(
gp
)
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