Man pages for rxSeq
Combined Total and Allele Specific Reads Sequencing Study
| data.A | Sample data example for autosomal genes |
| data.X | Sample data example for X chromosome genes |
| get.tausB | Produce _Xce_ estimates for mice with allele specific reads |
| nLogLik | Negative log likelihood for coefficients provided in results... |
| process | Optimization wrapper, maximizing either the joint model of... |
| rcA | Reformatted data for autosomal set to be used as input to... |
| rcX | Reformatted data for chromosome X set to be used as input to... |
| readCounts | A list object that should be used as input to optimization... |
| simRX | Produce simulated counts |
| trecase.A.out | Example of results produced by optimizing step using process... |
| trecase.X.out | Example of results produced by optimizing step using process... |
