compare_spawners: Compare simulation runs

In salmonMSE: Management Strategy Evaluation for Salmon Species

Compare simulation runs

Description

Create figures that compare results across two dimensions

Usage

compare_spawners(SMSE_list, Design, prop = FALSE, FUN = median)

compare_fitness(SMSE_list, Design, FUN = median)

compare_escapement(SMSE_list, Design, FUN = median)

Arguments

SMSE_list	A list of SMSE objects returned by salmonMSE()
Design	A data frame with two columns that describes the factorial design of the simulations. Used to label the figure. Rows correspond to each object in SMSE_list. There two columns are variables against which to plot the result. See example in https://docs.salmonmse.com/articles/decision-table.html.
prop	Logical, whether to plot absolute numbers over proportions
FUN	Summarizing function across simulations, typically stats::median() or base::mean()

Details

• compare_spawners() generates a time series of the composition of spawners

• compare_fitness() generates a time series of metrics (fitness, PNI, pHOS, and pWILD) related to hatchery production

• compare_escapement() generates a time series of the proportion of spawners and broodtake to escapement

Value

A ggplot object

salmonMSE documentation built on Aug. 20, 2026, 5:09 p.m.