Dataset_Size_LIGER: Check size of LIGER datasets

In scCustomize: Custom Visualizations & Functions for Streamlined Analyses of Single Cell Sequencing

Check size of LIGER datasets

Description

Returns size (number of cells) in each dataset within liger object along with other desired meta data.

Usage

Dataset_Size_LIGER(
  liger_object,
  meta_data_column = NULL,
  filter_by = NULL,
  print_filter = FALSE
)

Arguments

liger_object	LIGER object name.
meta_data_column	other meta data to include in returned data.frame.
filter_by	meta data column to filter data by. Will filter data to return only values for the largest dataset for each unique value in provided meta data column.
print_filter	logical, whether to print filtered results to console, default is FALSE.

Value

data.frame with dataset names, number of cells per dataset and if provided other meta data

Examples

## Not run: 
# Return values for all datasets

## End(Not run)

scCustomize documentation built on Aug. 26, 2025, 9:08 a.m.