ensembl_exAM_list: Immediate Early Gene (IEG) gene lists

In scCustomize: Custom Visualizations & Functions for Streamlined Analyses of Single Cell Sequencing

Immediate Early Gene (IEG) gene lists

Description

Ensembl IDs for immediate early genes (Ensembl version 112; 4/29/2024)

Usage

ensembl_exAM_list

Format

A list of three vectors

Mus_musculus_exAM_union_ensembl

Ensembl ID for exAM genes from source publication (see below)

Homo_sapiens_exAM_union_ensembl

Human Ensembl ID for exAM genes for homologous genes from mouse gene list

Homo_sapiens_exAM_micro_ensembl

Human Ensembl ID for exAM genes for human microglia list

Source

Gene list is from: SI Table 22 Marsh et al., 2022 (Nature Neuroscience) from \Sexpr[results=rd]{tools:::Rd_expr_doi("10.1038/s41593-022-01022-8")}. See data-raw directory for scripts used to create gene list.

scCustomize documentation built on Aug. 26, 2025, 9:08 a.m.