# Man pages for scanstatisticsSpace-Time Anomaly Detection using Scan Statistics

 aggregate_per_location Aggregate (sum) values over all data streams, and... aggregate_per_stream Aggregate (sum) values over all locations, and cumulatively... apply_rowwise Apply a function to each row of a matrix. closest_subsets Set of increasing sets from left to right of input vector. connected_neighbors Find the connected sets for a location and its k nearest... connected_to Return those elements in the second set which are connected... coords_to_knn Get the k nearest neighbors for each location, given its... df_to_matrix Convert a long data frame to a wide matrix. dist_to_knn Given a distance matrix, find the k nearest neighbors. estimate_baselines Estimate baselines based on observed counts. estimate_variances Estimate variances based on observed counts. estimate_zip_params Estimate the parameters of a ZIP distribution. exponential_lambda Compute the score for an individual exponential observation. exponential_priority Compute exponential priority function values cumulatively... exponential_qmax Calculates the largest value for which the exponential score... exponential_score Compute the exponential score for each priority subset, for... flexible_zones Computes the flexibly shaped zones as in Tango (2005). flipud Flip a matrix upside down gaussian_lambda Compute the score for an individual Gaussian observation. gaussian_priority Compute Gaussian priority function values cumulatively over... gaussian_qmax Calculates the largest value for which the Gaussian score... gaussian_score Compute the Gaussian score for each priority subset, for each... get_subset Get either a location or stream subset. get_zero_indices Get indices of zero elements in a vector. get_zone Extract a zone from the set of all zones. gumbel_pvalue Calculate the Gumbel p-value for a scan statistic. has_converged Is the relative error between two numbers is less than the... if_connected Return a set of the location and its neighbors if they are... is_connected Returns TRUE if the neighboring locations are connected to... knn_zones Find the increasing subsets of k nearest neighbors for all... matrix_to_df Convert a matrix to a data frame. mc_pvalue Calculate the Monte Carlo p-value for a scan statistic. mscan_fss Compute the Fast Subset Scan statistic for multivariate... NM_geo Longitude and latitude of New Mexico county seats. NM_map Data to plot the counties of New Mexico. NM_popcas Population and brain cancer cases in New Mexico counties... permute_matrix Permute the entries of the matrix, preserving row and column... poisson_lambda Compute the score for an individual Poisson observation. poisson_priority Compute Poisson priority function values cumulatively over... poisson_qmax Calculates the largest value for which the Poisson score... poisson_score Compute the Poisson score for each priority subset, for each... powerset_zones Creates a set of all non-empty subsets of the integers from 1... print.scanstatistic Print a scanstatistic object. prioritize_and_execute Order locations accorder to priority, then apply function. prioritize_cols Order row contents by priority for each timepoint. reorder_rows Reorder rows by priority. run_scan Run a scan statistic analysis. scan_bayes_negbin Calculate the negative binomial bayesian scan statistic.. scan_bayes_negbin_cpp Calculate the "Bayesian Spatial Scan Statistic" by Neill et... scan_eb_negbin Calculate the expectation-based negative binomial scan... scan_eb_negbin_cpp Calculate the expectation-based negative binomial scan... scan_eb_poisson Calculate the expectation-based Poisson scan statistic. scan_eb_poisson_cpp Calculate the expecation-based Poisson scan statistic. scan_eb_zip Calculate the expectation-based ZIP scan statistic. scan_eb_zip_cpp Calculate the highest-value EB ZIP loglihood ratio statistic. scan_pb_perm_cpp Calculate the space-time permutation scan statistic. scan_pb_poisson Calculate the population-based Poisson scan statistic. scan_pb_poisson_cpp Calculate the population-based Poisson scan statistic. scan_permutation Calculate the space-time permutation scan statistic. scanstatistics scanstatistics: Space-time anomaly detection using scan... score_locations Score each location over zones and duration. score_priority_subset Compute the highest scoring subset for aggregated data. subset_aggregation Subset Aggregation over locations and data streams, naive or... subset_aggregation_FF Fast Subset Aggregation over both locations and data streams. subset_aggregation_FN_NF Compute the most likely cluster using the FN/NF Subset... sum_over_subset For each array in a list, sum over dimension 'd'. sum_reorder_sum Cumulatively sum, order by priority, then sum again. top_clusters Get the top (non-overlappig) clusters.
scanstatistics documentation built on Jan. 24, 2018, 6:07 p.m.