Algorithms to calculate the hidden inputs of systems of differential equations. These hidden inputs can be interpreted as a control that tries to minimize the discrepancies between a given model and taken measurements. The idea is also called the Dynamic Elastic Net, as proposed in the paper "Learning (from) the errors of a systems biology model" (Engelhardt, Froelich, Kschischo 2016) <doi:10.1038/srep20772>. To use the experimental SBML import function, the 'rsbml' package is required. For installation I refer to the official 'rsbml' page: <https://bioconductor.org/packages/release/bioc/html/rsbml.html>.
Package details |
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Author | Tobias Newmiwaka [aut, cre], Benjamin Engelhardt [aut] |
Maintainer | Tobias Newmiwaka <tobias.newmiwaka@gmail.com> |
License | MIT + file LICENSE |
Version | 0.9.1 |
URL | https://github.com/Newmi1988/seeds |
Package repository | View on CRAN |
Installation |
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