importSBML: Import SBML Models using the Bioconductor package 'rsbml'

In seeds: Estimate Hidden Inputs using the Dynamic Elastic Net

Description

A simple function for importing sbml models from a extensive markup language file.

Usage

importSBML(filename, times, meas_input)

Arguments

filename	name of the import file. Should be located in the working directory.
times	timestep at which the function should be evaluated
meas_input	measurements have to be given in order to analyze the data

Value

returns a odeModel object

Examples

## Not run:  

t <- uvbData[,1]
y <- uvbData[,1:3]
modelFile <- system.file("extdata","BIOMD0000000545_url.xml", package = "seeds")

# generate an odeModel object
uvb <- importSBML(modelFile, times = t, meas = y)


## End(Not run)

seeds documentation built on July 14, 2020, 1:07 a.m.