PlotMutationFitnessSpectra: Plot fitness of mutations, weighted by frequency of those...

In selac: Selection Models for Amino Acid and/or Codon Evolution

Description

Plot fitness of mutations, weighted by frequency of those mutations

Usage

PlotMutationFitnessSpectra(mutation.fitness.object.list, values,
  optimal.aa = NULL, palette = "Set1", lwd = 2, ...)

Arguments

mutation.fitness.object.list	List that contains multiple objects from ComputeMutationFitnesses() calls
values	The vector of labels for each matrix (i.e., different Phi values)
optimal.aa	Single letter code for the optimal aa. If NULL, integrates across aa.
palette	Color palette to use from RColorBrewer
lwd	Line width
...	other arguments to pass to plot()

selac documentation built on July 1, 2020, 10:08 p.m.